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Name : S1004 (S1004) Accession : NP_836646.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Unknown Product : IS1 orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1662 EC number : - Position : 989411 - 989914 bp Length : 504 bp Strand : - Note : residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] DNA sequence : ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT AACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAAT CACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTG GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGA ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGAC AACATCTGGCAAGGCTGGTACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGCCATCGGGCATTAT CTGAACATAAAACACTATCAGTAA Protein sequence : MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKAIGHY LNIKHYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 3e-49 | 99 |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | Protein | 7e-68 | 99 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | Protein | 7e-67 | 99 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | Protein | 7e-67 | 99 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | Protein | 1e-67 | 99 |
| aec38 | AAW51721.1 | InsB | Not tested | AGI-3 | Protein | 2e-52 | 99 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 2e-67 | 98 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | Protein | 2e-62 | 92 |
| EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | Protein | 2e-62 | 89 |
| EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | Protein | 2e-62 | 89 |
| insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | Protein | 2e-62 | 89 |
| InsB (Tn1) | CAJ77072.1 | Transposase | Not tested | AbaR1 | Protein | 8e-60 | 88 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S1004 | NP_836646.1 | IS1 orfB | VFG0612 | Protein | 6e-68 | 98 |
