Gene Information

Name : EF_B0052 (EF_B0052)
Accession : NP_817070.1
Strain :
Genome accession: NC_004671
Putative virulence/resistance : Unknown
Product : IS256, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 46844 - 48016 bp
Length : 1173 bp
Strand : -
Note : similar to GB:X55668, GB:M29142, GB:X56132, SP:P24158, PID:1335280, PID:187399, PID:188984, PID:35190, PID:35193, PID:747844, GB:X55668, GB:M29142, GB:X56132, SP:P24158, PID:1335280, PID:187399, PID:188984, PID:35190, PID:35193, and PID:747844; identified

DNA sequence :
ATGACCCAAGTACATTTTACACTGAAAAGCGAAGAGATTCAAAGCATTATTGAATATTCTGTAAAGGATGACGTTTCTAA
AAATATTTTAACAACGGTATTTAATCAACTAATGGAAAATCAACGAACAGAATATATTCAAGCAAAAGAATATGAACGAA
CAGAAAACCGACAAAGTCAACGAAATGGCTATTATGAGCGCAGCTTTACGACACGTGTAGGCACGCTAGAATTAAAAGTA
CCCAGAACACGTGATGGCCATTTTTCACCCACAGTGTTTGAACGTTATCAACGAAACGAAAAAGCCCTCATGGCTTCAAT
GTTGGAAATGTATGTATCAGGCGTTTCAACTCGTAAAGTATCAAAAATTGTGGAAGAACTTTGTGGTAAATCCGTCTCTA
AGTCCTTCGTTTCTAGCTTAACAGAACAGCTAGAACCTATGGTTAACGAGTGGCAGAATCGTTTATTATCAGAAAAAAAT
TATCCTTACTTAATGACCGATGTACTCTATATAAAAGTACGAGAAGAAAATCGAGTACTCTCAAAAAGCTGTCATATAGC
GATTGGAATAACCAAAGATGGCGACCGTGAAATTATCGGCTTCATGATTCAAAGTGGCGAAAGCGAAGAGACCTGGACAA
CATTTTTTGAATACCTAAAAGAACGCGGTTTACAAGGTACGGAACTCGTTATTTCTGATGCGCACAAAGGATTAGTCTCT
GCCATTAGAAAATCCTTCACCAACGTAAGTTGGCAAAGATGCCAAGTTCACTTCCTAAGAAATATCTTTACCACCATTCC
TAAAAAAAATTCAAAATCTTTCAGAGAAGCTGTTAAAGGAATTTTTAAGTTCACAGATATTAACTTAGCGCGTGAGGCTA
AAAATCGATTGATTCATGATTATATCGATCAACCAAAATATTCAAAAGCTTGCGCATCATTGGATGATGGATTCGAAGAC
GCCTTTCAATATACCGTACAAGGAAATTCCCACAATCGACTAAAGAGTACCAATCTAATTGAACGACTGAATCAAGAAGT
ACGCAGAAGAGAAAAGATTATTCGCATCTTCCCCAATCAAACATCAGCCAATCGCTTAATTGGAGCCGTTCTTATGGACC
TACATGATGAATGGATTTATTCTTCAAGAAAATACATCAATTTTGATAAGTAG

Protein sequence :
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKV
PRTRDGHFSPTVFERYQRNEKALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKN
YPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVS
AIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFED
AFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC67572.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 0.0 100
unnamed BAC67574.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 0.0 100
EF0529 NP_814305.1 IS256, transposase Not tested Not named Protein 0.0 100
SERP1584 YP_189149.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 0.0 100
SERP1587 YP_189152.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 0.0 100
IS256 BAC22941.1 IS256 transposase Not tested etd PI Protein 0.0 100