Gene Information

Name : ssb-6 (EF_B0043)
Accession : NP_817061.1
Strain :
Genome accession: NC_004671
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 38024 - 38476 bp
Length : 453 bp
Strand : +
Note : similar to GP:9789553, and GP:9789553; identified by sequence similarity; putative

DNA sequence :
ATGATTAATAATGTGACTTTAGTAGGAAGACTTACAAAAGATTGTGATTTACGTTATACGTCAAGTGGTGTAGCTGTTGC
GGCTTTTACACTAGCAGTTAACCGGAATTTTACGAATCAAAATGGTGAACGTGAAGCAGACTATATTCAGTGTGTGATTT
GGCGTAAACCTGCAGAAACTTTAGCAAACTATACACGAAAAGGAACATTGATTGGTCTTGTGGGTAGACTTCAAACACGT
AACTATGAGAATCAACAAGGACAACGTATTTATGTGACAGAAGTGGTTGTAGAAAGCTTCCAATTGTTAGAGTCAAAAGA
AGTTAGTCAACAACGTGGTGTTAACGCTTCTAATCCTACACCAGTTGGGCAGCAGGAAAGCAATACGCAACAACCCTTTC
CAGATTTAGAAGGTAGTTCTATTGAGATTTCAGATCATGACTTACCGTTTTAA

Protein sequence :
MINNVTLVGRLTKDCDLRYTSSGVAVAAFTLAVNRNFTNQNGEREADYIQCVIWRKPAETLANYTRKGTLIGLVGRLQTR
NYENQQGQRIYVTEVVVESFQLLESKEVSQQRGVNASNPTPVGQQESNTQQPFPDLEGSSIEISDHDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 4e-46 69
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 5e-46 69
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-36 63
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-29 63
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-28 61
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 6e-29 60
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 6e-30 53
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 4e-27 53
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-27 53
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 5e-30 52
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 5e-33 50
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-33 50
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-32 49
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-32 49
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-32 48
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-32 48