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Name : EFA0016 (EFA0016) Accession : NP_816945.1 Strain : Genome accession: NC_004669 Putative virulence/resistance : Unknown Product : IS6 family transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3316 EC number : - Position : 12615 - 13304 bp Length : 690 bp Strand : - Note : Related to but different from IS1216.; similar to GP:1019106, and GP:2467239; identified by sequence similarity; putative DNA sequence : ATGAAAAATCAGTTTAAAGGAAAACAGTATGACTATCGAATTATTATAGAAGCCATCGGGTTATACTATCACTTTTCTTT GAGCTATCGTGATTGTGCCAAAATCATGCGTAAATTTAGTGTTGGCGTGGATCATACCACAATTTACCGCTGGAACAAAG AGTATGGAAAAATCCTTTATCATCTATGGAATAAACGTAGATCCTTATCAAAATCCTGGCGGATTGATGAGACCTATGTC AAAGTGAAAGGTCAAGATCGGTATCTTTATCGAGCCATTGATTCGAAGGGCAATACGTTAGATATGTGGCTACGAAACCA TCGTGATACTGTCTCTACTAAAGCCTTTTTCAAGCGTCTAATCAGAGTCTACGGTCAACCACGTTCCATTGTAACAGATA AATATGCTCCTTCATTAAAAGCGATCAAAGAGCTGAAAGAAGAAGGAATTCTATACCAAAAAGTGAAGCATTGGAAGTCG AAATACCTCAATAATATTCTTGAACAGGATCACCGACAGTTGAAGGGGAAGCTTCCTTATGGCAACAACTTTCAGTCCAC CTATACAGCTGCAGTAACGATTAAAGGAATCGAAGTTGTTTCTGCTTTATACAAAGAAAGTCGAAGAGAAATTGGTCTCT TCGACTTTTCCCCGTGGGAAGAAATTGATACTCTATTCAAATCAGCTTAA Protein sequence : MKNQFKGKQYDYRIIIEAIGLYYHFSLSYRDCAKIMRKFSVGVDHTTIYRWNKEYGKILYHLWNKRRSLSKSWRIDETYV KVKGQDRYLYRAIDSKGNTLDMWLRNHRDTVSTKAFFKRLIRVYGQPRSIVTDKYAPSLKAIKELKEEGILYQKVKHWKS KYLNNILEQDHRQLKGKLPYGNNFQSTYTAAVTIKGIEVVSALYKESRREIGLFDFSPWEEIDTLFKSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0041 | AAM75240.1 | EF0034 | Not tested | Not named | Protein | 3e-42 | 49 |
| tnp | YP_252008.1 | transposase for IS431mec | Not tested | SCCmec | Protein | 2e-40 | 47 |
| tnp | YP_252034.1 | transposase for IS431mec | Not tested | SCCmec | Protein | 8e-41 | 47 |
| ef0039 | AAM75245.1 | EF0039 | Not tested | Not named | Protein | 2e-36 | 47 |
| tnp | BAD24823.1 | transposase for IS431 | Not tested | Type-V SCCmec | Protein | 1e-40 | 46 |
| unnamed | BAB47648.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | Protein | 3e-40 | 46 |
| tnp | NP_370560.2 | transposase for IS-like element | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| SE0090 | NP_763645.1 | transposase for IS-like element | Not tested | SCCpbp4 | Protein | 4e-40 | 46 |
| tnp | BAA86652.1 | transposase | Not tested | Type-I SCCmec | Protein | 2e-40 | 46 |
| SA0026 | NP_373265.1 | transposase for IS-like element | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| tnp | YP_251940.1 | transposase for IS431mec | Not tested | SCCmec | Protein | 4e-40 | 46 |
| unnamed | BAB47631.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | Protein | 2e-40 | 46 |
| unnamed | BAD24828.1 | transposase for IS431 | Not tested | Type-V SCCmec | Protein | 2e-39 | 46 |
| SA0034 | NP_373274.1 | transposase for IS-like element | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| SACOL0028 | YP_184939.1 | IS431mec, transposase | Not tested | Type-I SCCmec | Protein | 2e-40 | 46 |
| tnp | BAB72117.1 | transposase of IS431mec | Not tested | Type-IVa SCCmec | Protein | 2e-40 | 46 |
| unnamed | ACL99852.1 | transposase | Not tested | Type-V SCCmec | Protein | 8e-40 | 46 |
| SAUSA300_0028 | YP_492748.1 | putative transposase | Not tested | Type-IV SCCmec | Protein | 2e-40 | 46 |
| SAR0027 | YP_039504.1 | transposase | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| SAPIG0038 | YP_005732848.1 | transposase | Not tested | Type-V SCCmec | Protein | 1e-39 | 46 |
| tnp | BAB72136.1 | transposase of IS431mec | Not tested | Type-IVb SCCmec | Protein | 2e-40 | 46 |
| tnp | BAG06195.1 | transposase for IS431 | Not tested | Type-VII SCCmec | Protein | 8e-40 | 46 |
| SERP2526 | YP_190067.1 | IS431mec-like transposase | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| SAR0034 | YP_039511.1 | transposase | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| SE0071 | NP_763626.1 | transposase for IS-like element | Not tested | SCCpbp4 | Protein | 1e-39 | 46 |
| tnp | BAC67570.1 | transposase of IS431mec | Not tested | Type-IVc SCCmec | Protein | 2e-40 | 46 |
| tnp | YP_252002.1 | transposase for IS431mec | Not tested | SCCmec | Protein | 2e-40 | 46 |
| SAMSHR1132_00280 | YP_005324552.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 2e-40 | 46 |
| SERP1579 | YP_189144.1 | IS431mec-like transposase | Not tested | ¥ÕSP¥â | Protein | 6e-40 | 46 |
| unnamed | BAA82228.1 | transposase for insertion sequence-like element IS431mec | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| unnamed | BAB47635.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | Protein | 5e-40 | 46 |
| MW0027 | NP_644842.1 | transposase for IS-like element | Not tested | Type-IV SCCmec | Protein | 2e-40 | 46 |
| SE0079 | NP_763634.1 | transposase for IS-like element | Not tested | SCCpbp4 | Protein | 6e-40 | 46 |
| unnamed | BAA82238.1 | transposase for insertion sequence-like element IS431mec | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| unnamed | BAB47638.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | Protein | 3e-40 | 46 |
| tnp | NP_370551.1 | transposase for IS-like element | Not tested | Type-II SCCmec | Protein | 2e-40 | 46 |
| SAPIG0054 | YP_005732864.1 | transposase | Not tested | Type-V SCCmec | Protein | 4e-40 | 46 |
| unnamed | AAP55235.1 | transposase | Not tested | SaPIbov2 | Protein | 5e-40 | 46 |
| tnp | YP_254240.1 | transposase for IS431mec | Not tested | ¥ðSh1 | Protein | 5e-39 | 45 |
| IS26 | CAJ77080.1 | Insertion sequence | Not tested | AbaR1 | Protein | 9e-17 | 42 |
