Gene Information

Name : vanB (EF2294)
Accession : NP_815951.1
Strain : Enterococcus faecalis V583
Genome accession: NC_004668
Putative virulence/resistance : Resistance
Product : D-alanine--D-lactate ligase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1181
EC number : -
Position : 2212967 - 2213995 bp
Length : 1029 bp
Strand : -
Note : vancomycin B-type resistance protein; catalyzes the formation of D-alanyl-D-lactate in peptidoglycan synthesis

DNA sequence :
ATGAATAAAATAAAAGTCGCAATTATCTTCGGCGGTTGCTCGGAGGAACATGATGTGTCGGTAAAATCCGCAATAGAAAT
TGCTGCGAACATTAATACTGAAAAATTCGATCCGCACTACATCGGAATTACAAAAAACGGCGTATGGAAGCTATGCAAGA
AGCCATGTACGGAATGGGAAGCCGATAGTCTCCCCGCCATATTCTCCCCGGATAGGAAAACGCATGGTCTGCTTGTCATG
AAAGAAAGAGAATACGAAACTCGGCGTATTGACGTGGCTTTCCCGGTTTTGCATGGCAAATGCGGGGAGGATGGTGCGAT
ACAGGGTCTGTTTGAATTGTCTGGTATCCCCTATGTAGGCTGCGATATTCAAAGCTCCGCAGCTTGCATGGACAAATCAC
TGGCCTACATTCTTACAAAAAATGCGGGCATCGCCGTCCCCGAATTTCAAATGATTGAAAAAGGTGACAAACCGGAGGCG
AGGACGCTTACCTACCCTGTCTTTGTGAAGCCGGCACGGTCAGGTTCGTCCTTTGGCGTAACCAAAGTAAACAGTACGGA
AGAACTAAACGCTGCGATAGAAGCAGCAGGACAATATGATGGAAAAATCTTAATTGAGCAAGCGATTTCGGGCTGTGAGG
TCGGCTGCGCGGTCATGGGAAACGAGGATGATTTGATTGTCGGCGAAGTGGATCAAATCCGGTTGAGCCACGGTATCTTC
CGCATCCATCAGGAAAACGAGCCGGAAAAAGGCTCAGAGAATGCGATGATTATCGTTCCAGCAGACATTCCGGTCGAGGA
ACGAAATCGGGTGCAAGAAACGGCAAAGAAAGTATATCGGGTGCTTGGATGCAGAGGGCTTGCTCGTGTTGATCTTTTTT
TGCAGGAGGATGGCGGCATCGTTCTAAACGAGGTCAATACCCTGCCCGGTTTTACATCGTACAGCCGCTATCCACGCATG
GCGGCTGCCGCAGGAATCACGCTTCCCGCACTAATTGACAGCCTGATTACATTGGCGATAGAGAGGTGA

Protein sequence :
MNKIKVAIIFGGCSEEHDVSVKSAIEIAANINTEKFDPHYIGITKNGVWKLCKKPCTEWEADSLPAIFSPDRKTHGLLVM
KEREYETRRIDVAFPVLHGKCGEDGAIQGLFELSGIPYVGCDIQSSAACMDKSLAYILTKNAGIAVPEFQMIEKGDKPEA
RTLTYPVFVKPARSGSSFGVTKVNSTEELNAAIEAAGQYDGKILIEQAISGCEVGCAVMGNEDDLIVGEVDQIRLSHGIF
RIHQENEPEKGSENAMIIVPADIPVEERNRVQETAKKVYRVLGCRGLARVDLFLQEDGGIVLNEVNTLPGFTSYSRYPRM
AAAAGITLPALIDSLITLAIER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanB NP_815951.1 D-alanine--D-lactate ligase Not tested Not named Protein 2e-160 100
vanB YP_008394259.1 Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase Not tested Not named Protein 3e-153 96

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vanB NP_815951.1 D-alanine--D-lactate ligase U00456.gene.p01 Protein 9e-161 100
vanB NP_815951.1 D-alanine--D-lactate ligase U35369.1.gene6.p01 Protein 9e-161 100
vanB NP_815951.1 D-alanine--D-lactate ligase AE016830.1.gene2250. Protein 9e-161 100
vanB NP_815951.1 D-alanine--D-lactate ligase AF310956.2.orf5.gene Protein 2e-155 96
vanB NP_815951.1 D-alanine--D-lactate ligase AY145441.gene.p01 Protein 1e-155 96
vanB NP_815951.1 D-alanine--D-lactate ligase NC_005054.2598280.p0 Protein 2e-128 76
vanB NP_815951.1 D-alanine--D-lactate ligase NC_014475.1.orf3.gen Protein 2e-128 76
vanB NP_815951.1 D-alanine--D-lactate ligase AF277571.gene.p01 Protein 6e-120 69
vanB NP_815951.1 D-alanine--D-lactate ligase AF130997.1.orf4.gene Protein 3e-118 68
vanB NP_815951.1 D-alanine--D-lactate ligase AY489045.gene.p01 Protein 2e-117 68