Gene Information

Name : BT_4538 (BT_4538)
Accession : NP_813449.1
Strain : Bacteroides thetaiotaomicron VPI-5482
Genome accession: NC_004663
Putative virulence/resistance : Unknown
Product : typeI restriction enzyme EcoR124II M protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 5958057 - 5959610 bp
Length : 1554 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGAAGAATTACAGCAGAAACTCCGTGACCAGCTTTGGGAGGTTGCAAACCGTTTGCGTGGTAATATGTCGGCAAG
CGACTTTATGTATTTTACATTAGGTTTCATTTTTTATAAATACCTGTCGGAGAAAATAGAAAAATACGCCAACAATGCTT
TGGCAGATGATGATATAACTTTTAAGGAATTGTGGGAAACGGACGATGCCGATGCTATTGAATTGCAAGAGGAAGCAAAG
AACCAATGCCTGGAGAATATCGGTTATTTCATTGAGCCCCAATTTTTGTTTTCGTCAGTAATTGAAGCTATCAAGCGAAA
AGAAAACATCTTACCCATGCTTGAACGCTCATTGAAGCGTATTGAGGACAGTACTTTGGGACAAGACAGCGAAGATGATT
TTGGCGGTTTGTTCTCAGATATTGACTTGGCTTCGCCTAAATTGGGTAAGACAGCCGATGATAAAAATACACTTGTCAGC
AATGTGCTTCTTGCATTGGACGATATAAATTTTGGATTAGAGGCATCGCAAGAGATTGATATATTGGGTGATGCTTACGA
ATATATGATTTCACAGTTTGCTGCGGGAGCCGGAAAAAAGGCTGGAGAGTTCTATACTCCGCAGGAAGTTAGCCGTATCT
TAGCAGAGATTGTTGCCATTGGACACCAGCGTTTGCGCAATGTCTATGACCCTACTTGCGGTAGTGGTTCGTTGCTACTC
CGTGCTGCAAGTATCGGTAACGCAGTAGATATTTACGGACAGGAAAAGAATCCGACCACTTATAATCTTGCCCGAATGAA
TATGTTGCTTCACGGCATCAGGTTCAGCAACTTCAAGATTGAAAATGGTGATACACTTGAATGGGATGCGTTTGGCGATA
CCCAATTTGATGCAGTTGTAGCAAATCCTCCGTTCTCTGCTGAATGGAGTGCTGCCGACAAATTCAATACCGATGACCGT
TTCAGCAAAGCAGGACGGCTTGCACCACGTAAGACTGCCGATTATGCTTTTATTCTGCACATGATTTATCACTTGAACGA
GGGTGGAACAATGGCTTGTGTTGCTCCGCATGGTGTACTATTCCGAGGAAATGCGGAGGGAGTTATCCGTCGTTTCCTCA
TAGAAAAGAAAAACTATGTGGATGCCATTATAGGATTACCTGCGAATATTTTCTATGGCACAAGCATTCCGACTTGTATT
CTTGTTTTCAAGAAGTGCCGTAAAGAGGATGACAATATTCTGTTTATTGATGCAAGCAAGGAGTTTGAAAAGGTAAAGAC
TCAGAACAAACTCCGTGAACAGCATATTCAGAAGATTGTCGAAACTTATCGTGACCGCAAGGAAATAGAAAAGTACAGTC
ACCTTGCCTCTCTTCAAGAAATAGCCGAGAATGATTACAATCTGAATATTCCTCGTTATGTTGATACCTTTGAAGAGGAA
GAACCTATTGATATTAAAGCTGTAATGGCAGAAATAAAGGAATTGGAAGCCAAACGTGCTGAACTCGATAAAGAGATTGA
AGTGTACCTGAAAGAATTAGGCATTGTAGAATAG

Protein sequence :
MSEELQQKLRDQLWEVANRLRGNMSASDFMYFTLGFIFYKYLSEKIEKYANNALADDDITFKELWETDDADAIELQEEAK
NQCLENIGYFIEPQFLFSSVIEAIKRKENILPMLERSLKRIEDSTLGQDSEDDFGGLFSDIDLASPKLGKTADDKNTLVS
NVLLALDDINFGLEASQEIDILGDAYEYMISQFAAGAGKKAGEFYTPQEVSRILAEIVAIGHQRLRNVYDPTCGSGSLLL
RAASIGNAVDIYGQEKNPTTYNLARMNMLLHGIRFSNFKIENGDTLEWDAFGDTQFDAVVANPPFSAEWSAADKFNTDDR
FSKAGRLAPRKTADYAFILHMIYHLNEGGTMACVAPHGVLFRGNAEGVIRRFLIEKKNYVDAIIGLPANIFYGTSIPTCI
LVFKKCRKEDDNILFIDASKEFEKVKTQNKLREQHIQKIVETYRDRKEIEKYSHLASLQEIAENDYNLNIPRYVDTFEEE
EPIDIKAVMAEIKELEAKRAELDKEIEVYLKELGIVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 2e-149 59
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 2e-147 58
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-147 58
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 9e-148 58
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 1e-146 58
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 2e-147 58
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 2e-147 58
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 2e-147 58
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 2e-147 58
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 2e-147 58
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 2e-147 58
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 3e-147 58
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 2e-147 58
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 2e-147 58
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-147 57
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 2e-146 57
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 2e-147 57
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-146 57
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-147 57
ORF6 BAC22943.1 - Not tested etd PI Protein 8e-147 57
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-147 57
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 9e-146 57