Gene Information

Name : PSPTOA0010 (PSPTOA0010)
Accession : NP_808670.1
Strain :
Genome accession: NC_004633
Putative virulence/resistance : Unknown
Product : Tn3 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4644
EC number : -
Position : 11224 - 14193 bp
Length : 2970 bp
Strand : -
Note : This gene assignment is based in part on its location adjacent to a gene for resolvase.; similar to GP:1399356; identified by sequence similarity; putative

DNA sequence :
ATGCCACGTCGCTCGATTCTTTCCCTTGCGGAGCGGGAAAGCTTACTGGCGTTGCCAGATTCCCAAGATGAAATGATTCG
TCACTACTCTTTCAGCGAAACCGACCTCGCCATCATCCGCCAACGGCGTGGGTCTGCAAATCGGCTGGGCTTCGCTGTAC
AGCTCTGTTACATGCGCTATCCCGGGGTAACACTTGCTATGGATGAAGAACCATTCGAGCCATTGCTGCGCTTGGTGGCC
ACGCAACTGAAGGTGCCGCCTGAAGCATGGGCTGACTATGGGCAACGCGCCGAGACGCGCCGCGAGCACCTGTTGGAATT
ACAAGCTCTTTTTGAGTTTCAGCCATTCACAACAAGACATTATCGTCCCTGCGTTCATAGTTTGGATGAACTGGCATGGC
AGTCCGACAAAGGCTTCGTGTTGGCGACGGAGTTGGTTGAAGGGTTGCGACGACAGAACATATTGCTTCCATCACCAGGT
GTGATCGAGCGCATTTGTGCTGAGGCAATCACCCGCGCCAATCGGCGGATCTATGAAGCCTTGTCCGAGCCTCTTTCGAA
TACACACCGCCGTTGCCTCGATGGCCTCCTTAGACGCCGAGACAAAGGCCAGACCACCTGGTTGGCCTGGTTACGCCAGT
CGCCAGTTAAACCGAACTCACGGCACATGCTTGAACACATCGAGCGCCTCAAAGCATGGCAGGCTCTCGATCTACCAGCA
GGCATTGAGCGGCTGGTTCACCAGAATCGCCTGCTCAAAATTGCCCGTGAAGGCGGCCAAATGACACCTGCTGACTTGTC
CAAGTTCGAATTGCAACGACGCTACGCTACCCTTGTGGCACTGGCCATCGAGGGCATGGCCACCGTCACTGACGAAATCA
TCGACCTGCACGATCGTATCCTGGGCAAGCTGTTTAACGCAGCCAAGAATAAACACCAGAAACAGTTCCAGGCATCCGGA
AAAGCGATCAACGCAAAGGTGCGAATTTATGGACGCATCGGCCAAGCCCTGCTGGAGGCCAAGCAAAACGGCTGCGATCC
GTTTGCTGCCATCGAAGCGGTCATGTCTTGGGAGGCTTTCGCCAAGAGTGTCACCGAAGCGCAAAAACTTGCACAGCCCG
AAGACTTCGACTTCCTGCACCGCATCGGCGAGAGCTACGCCACGTTGCGCCGCTATGCTCCGCAGTTTCTCGACGTACTC
AAGCTGCGGGCTGCGCCCGCAGCCAAGGACGTGTTTGAAGGCATTGAGGTATTGCGCGCAATGAACACTGACAACGCCCG
TAAGGTTCCCGTCGATGCCCCGATCGGGTTCATCAAGAAGCGCTGGAAGAAACTGGTTATAACCGACGGCGGTATCGACC
GGCGCTACTACGAACTGTGCGTGATGTCGGAACTAAAGAACGCGCTGCGCTCTGGAGATATTTGGGTGCAGGGATCGCGT
CAGTTCAAGGACTTCGAGGATTACCTGATGCCATCCGAGAAATTCGCCCATCTCAAGCTGGCCCATGAATTGCCTCTGGC
CGTAGCCACCGACTGCGACAAATACCTGAACGACCGGTTGACGCTGTTGGAAGCTCAGCTTGCCACCGTGAACCGCATGG
CTCTAGCCAATGACTTACCGGATGCCATCATCACCGAGTCTGGTTTGAAGATCACGCCTCTGGATGCGGCAGTGCCAGAT
ACCGCACAGGCGTTGATTGATCAAACCGCAATGGCTATGCCGCATATCAAGATCACCGAATTGTTGTTGGAGGTGGACGA
GTGGACAGGATTCACCCGGCATTTCGCACATCTGAAATCGGGTGACCTGGCCAAGGATAAGCACTTACTGTTGTCCACCA
TCCTGGCTGATGCGATCAACCTAGGCCTGGCTAAAATGGCCGAGTCTTGCCCTGGCACCACCTACGCAAAACTGTCCTGG
CTACAAGCCTGGCACATCCGTGACGAAACCTATTCGGCCGCGCTGGCTGAGCTAGTAAACGCGCAGCTCCAACATCCTTT
TTCCAAGCATTGGGGTGACGGTACCACATCATCGTCAGATGGACAGAATTTCAGAACTGGCAGCAAAGCCGAGAGTACGG
GTCACATCAATCCCAAATACGGCAGCAGCCCGGGACGAACTTTTTACACCCACATTTCTGACCAGTACGCCCCGTATCAC
CTGAAGGTGGTCAACGTTGGCGTGCGCGATTCTACCTATGTGCTTGACGGGCTTCTGTATCACGAATCTGACCTGCGTAT
TGAGGAGCACTACACGGATACTGCGGGCTTCACAGATCACGTCTTCGGTCTGATGCATTTACTGGGTTTTCGCTTTGCAC
CGCGCATCCGCGACCTAGGCGATACCAAGCTGTTCGTGCCCCAAGGAAATATCGATTATGACGCGATTAAGTCAATGATT
AGTAAAGAAAAACTGGATATCAAGGCCATTCGGACGCACTGGGATGAAATTCTGAGGCTGGCCACCTCGATCAAACAAGG
TACCGTGACTGCCTCGCTGATGTTGCGCAAGCTGGGTAGTTATCCTCGGCAGAACGGCTTAGCCGTTGCCCTTCGCGAAA
TCGGTCGCATCGAACGCACGCTGTTCATTTTGGACTGGCTACAAAGTGCCGAGCTGCGCCGTCGTGTGAATGCAGGACTG
AACAAGGGCGAAGCGCGCAATGCGCTGGCCAGGGCTGTCTTCTTTAACCGGCTGGGCGAAATCCGAGACCGTAGCTTCGA
ACAGCAACGCTACCGTGCCAGCGGCCTCAACTTGGTGACTGCTGCAATAGTGCTGTGGAACACGGTTTACCTGGAGCGGT
CCGCAAACGCATTACGCGGACATAGCACCGCTGTCGATGAATCGCTGCTGCAGTACCTGTCGCCGCTGGGCTGGGAGCAC
ATCAACCTAACTGGTGATTACCTGTGGCGCAGCACCGTCAAGGTTGGTGGAGGAAGATTCCGGCCATTACGACGACTGAA
ATCAGCTTAA

Protein sequence :
MPRRSILSLAERESLLALPDSQDEMIRHYSFSETDLAIIRQRRGSANRLGFAVQLCYMRYPGVTLAMDEEPFEPLLRLVA
TQLKVPPEAWADYGQRAETRREHLLELQALFEFQPFTTRHYRPCVHSLDELAWQSDKGFVLATELVEGLRRQNILLPSPG
VIERICAEAITRANRRIYEALSEPLSNTHRRCLDGLLRRRDKGQTTWLAWLRQSPVKPNSRHMLEHIERLKAWQALDLPA
GIERLVHQNRLLKIAREGGQMTPADLSKFELQRRYATLVALAIEGMATVTDEIIDLHDRILGKLFNAAKNKHQKQFQASG
KAINAKVRIYGRIGQALLEAKQNGCDPFAAIEAVMSWEAFAKSVTEAQKLAQPEDFDFLHRIGESYATLRRYAPQFLDVL
KLRAAPAAKDVFEGIEVLRAMNTDNARKVPVDAPIGFIKKRWKKLVITDGGIDRRYYELCVMSELKNALRSGDIWVQGSR
QFKDFEDYLMPSEKFAHLKLAHELPLAVATDCDKYLNDRLTLLEAQLATVNRMALANDLPDAIITESGLKITPLDAAVPD
TAQALIDQTAMAMPHIKITELLLEVDEWTGFTRHFAHLKSGDLAKDKHLLLSTILADAINLGLAKMAESCPGTTYAKLSW
LQAWHIRDETYSAALAELVNAQLQHPFSKHWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPYH
LKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGDTKLFVPQGNIDYDAIKSMI
SKEKLDIKAIRTHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALREIGRIERTLFILDWLQSAELRRRVNAGL
NKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERSANALRGHSTAVDESLLQYLSPLGWEH
INLTGDYLWRSTVKVGGGRFRPLRRLKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 84
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 82
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 82
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 70
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTOA0010 NP_808670.1 Tn3 family transposase VFG1031 Protein 0.0 82