Gene Information

Name : PSPTO_B0030 (PSPTO_B0030)
Accession : NP_808618.1
Strain :
Genome accession: NC_004632
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25779 - 26615 bp
Length : 837 bp
Strand : +
Note : similar to GP:18077130, and GP:18077130; identified by sequence similarity; putative

DNA sequence :
ATGCGTATGTCCAGCAACTTCCGTAACCCATGCATGATCCGCAGTGACGTCCCACTGAGCAACGATCAGATCGCCCACTA
TGTGCCTTCCATCTTCGCCGAAGAAGCGCACGACAGCAGGTCGGCACGTTATCTGTATATCCCGACCGTGCAGGTACTTG
ATGCGCTGCGCGCCGAAGGATTTGAACCATTCATGGCCTGTCAGACACGCGTGCGTGACCAGGGCAAACGTGAGCACACC
AAGCACATGCTGCGCCTGCGCCATGCGAGCCAGATCCTGGACCAGGAAGCCAACGAAGTCATCCTGCTCAACAGCCACGA
TGGCAGCAGCAGCTATCAGATGATTGGAGGCAAATTCCGTTTCGTGTGTGCAAACGGACTGGTACTGGGGGACGTTGCTG
CTGACCAGAAAGTGCGCCATAGCGGCCGTGGTGATGTGGTGCATGACGTGATCGAAGGCGCCTTCGAAGTGTTGAAGCAT
TTCGAACAGATCGACCACATCACCGCTGACATGAAGCATCAACAATTAGACCAGGACGAGCAAGAGGCCTTTGCATTGGC
TGCCTTGGCGTATCGCTACGATCCGGCAGAAGGACCTGCGCCTGTTACCCCGTCCCAGTTGCTCATGCCACGCCGTCGGG
AGGACCGTAGCAGCGACCTTTGGACCACCTTCAATCGAGTCCAGGAAAACACCATCAAAGGCGGTTTGACCGGGCGTAAC
AAGCAAGGCCGACGCACGACCACGCGAGCGGTCAATGGGATTGATCAGGACGTGAAACTGAACCGGGCCTTGTGGGTGCT
TGCGCAGGCTATGGGTGAGCACAGAAAAGCCGCTTAA

Protein sequence :
MRMSSNFRNPCMIRSDVPLSNDQIAHYVPSIFAEEAHDSRSARYLYIPTVQVLDALRAEGFEPFMACQTRVRDQGKREHT
KHMLRLRHASQILDQEANEVILLNSHDGSSSYQMIGGKFRFVCANGLVLGDVAADQKVRHSGRGDVVHDVIEGAFEVLKH
FEQIDHITADMKHQQLDQDEQEAFALAALAYRYDPAEGPAPVTPSQLLMPRRREDRSSDLWTTFNRVQENTIKGGLTGRN
KQGRRTTTRAVNGIDQDVKLNRALWVLAQAMGEHRKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-79 59
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 1e-77 59
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 8e-67 53
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 5e-67 53
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 5e-67 53
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 7e-70 53
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 4e-68 53
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-66 52
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 6e-66 52
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 9e-68 52
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 6e-66 52
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 9e-68 52
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 9e-68 52
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-64 51
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-64 50
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-64 50
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-64 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_B0030 NP_808618.1 hypothetical protein VFG1526 Protein 4e-67 53
PSPTO_B0030 NP_808618.1 hypothetical protein VFG1615 Protein 2e-66 52
PSPTO_B0030 NP_808618.1 hypothetical protein VFG0658 Protein 2e-66 52
PSPTO_B0030 NP_808618.1 hypothetical protein VFG1676 Protein 7e-65 51