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Name : tviD (t4350) Accession : NP_807943.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Virulence Product : VI polysaccharide biosynthesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG4235 EC number : - Position : 4501859 - 4504354 bp Length : 2496 bp Strand : - Note : corresponds to STY4659 from Accession AL513382: Salmonella typhi CT18 DNA sequence : ATGAATTTAATGAAATCGTCAGGGATGTTTACGCTTACAGCCATTGGCAGTTGCCGTATTGTGAGTCCGGTAAAACGAGC TCAGCCTTATTTTAATTTTCAGGCAAACTTTAAGAGAATATATGGTTTTACGCATACGAGCAGCGAGGCATTACAGCAGA TTCGGTTTATTTTGGGCTTGATAGACATTCCTGAAAAGGTCCGACCATTTATTTTTAGACCTAATGTAAACTATTCAAAC ACCGACGTACATAGTCGTTCTGATTTCTATATCATTGAGATTTCAAGTCAGAAGAAGATTATGGCCTATGGGTTCTGCTT ACAAATAAATTATTTAACTCGTCATTTCTATGAATTTTTTAGCCAAACAGAGCGGGCGTGCATGTACTGGTCGTTGGCCA CGCAAGGAAATCGACACAAACTGCTGGCCTATCTCAAAGACGATCCCTGTTTTGCCGGAATGTCGGAAGACGATCGTGCC TTATTAAGCAATATCAATGTCGAGCAGATGGATGAGCATGCTATCGAACAGGATATGATGGAAATCGTTCAGCTTCTTGG TCGCGATCGCGTTATGTTTATGACACATGTTGATGCCGTGACTCGTGCTGGAACCGTCATTCTATCCCGTAGTCGGTTGA TTAAAAATGTCGACACCATCGCCGCCAGGATGGATATTCCCTGCGTTAACCCGACAAATTTGATGGAAAAGTGGGGGCAG AAACGAGCCCTGGAAAAAAATGGCGACGATCTTACTCATTATACCGATATGTTTGGTGACGCGATCGTTGCGGCTATTTT TAAGGGAGTGATCAATAATACTAATCATCATCTTGATGAGGGGCGACAAGAGAAACAGGACCAAATACGTGAGATTACCT TATCGATCACTAAGCAGCTTGCAGATGGCGACATTATTGCTGCATCACAACAACTTTTTGCCGCATTAAGAAATCAGCAG CAAGATCCCGTTCTAATCCAACTTCGGTCCGTAATCTTCAGCCATTTAGGTTATTATGAACAGGCTTATCAGGATATTAG TGATGTTGAGAAAATTATCGGTACGACTGACAGTACATTACGTTGTCGGCTGAGGTCTCTACATGGATTAGCGCGTTGGC GGGAAGCCTTATCGACGGCAGAGATGATGCTTTCCAATGAAATTGAAGATGAAGAAGTCCTTACCGTTGCCGCCGGCTCA GCCGATGCTTTACAGCTGTTTGATAAGTCATATCATTATTGGAAACGTGTACTATTATTGAATCCTGAAACTCAAAGCGG ATGGGTTAATTTCCTGAGCAGCACGCAATATTTCAATGATGGCAACGCATTCTCTGAAGCTTTCCATGCCGGCATTCAAT CGCAGCGCCTAAATGATACGTTTATGGAAACGGCGTTATCTTTGGCAATCAAATTCAGTGATGAATTGATTTTCATGCAT GCGCTCGAGCAGCTACTCCGCCATGAGTCAGAATTTGCGCTGACGGTATTGTCGACGATTCATGATACCGGTCTCGTTAT CCGCACAGCTTTCTGCATCAAGAATATGAGCTATCATCAAGCGCTTCGCACCTCGTATAAAGATAAAATCCACGACGTTT TTGAGGCATGGAACAATACCGCGCTGTCGCTACATTCGGTTGATGATTTTGTCTCACTGAGTACTTCGCTAGCCTATAGC TACTCTGCATTTATGGTTTATCCCCATTCACGTATTTCTCGCTTTAATAATGAAGTTAAAATGGCATGGCGCGATAAATT AAGAGAAATGTATGAGCGTGAGGATTATGAAAATATCCTGGCAGGGGCGAAAATAGTGTGGCCACTTCTGAAGTTTGATC CCGTTGGCACCGTATATTGTGCAAGAACGCTGGTGAATCTTGGTGCCTGGAAAGACGCGTGCACGTTGGCCCACATGACC TTGATTCGTAACTCGAACATTACCAGCCTGCAGTCGATTATGTTACGCAGCATACGTCATATTAACAACATTCCGTTCCT CATTGATTTGATTGCTAACGTCATGAGCATTACTCTATCATTCCAGAATGCCTCAATGAACAAGTTGTTTGAGAAAGAGT GTCGCAATGTTGCAACCAGAGCCCTTAAATATGTACGCCAGAAGAAAACTGAAGGGCGTCTGGATGAAGCATTGTCTGTA TTGATTAGCCTGAAACGAATTGAGCCTGATGTTTCTCGTCTGATGCGTGAATATAAGCAAATTATCAGATTATTTAATGA GTCACGGAAGGATGGCGGTAGCACTATCACGTCTTATGAACATCTAGACTATGCGAAAAAATTACTCGTTTTTGATAGCG AAAATGCCTATGCCTTGAAATATGCCGCATTAAATGCAATGCATTTACGCGACTACACGCAGGCTTTGCAGTATTGGCAG CGACTGGAGAAAGTGAATGGACCAACGGAGCCGGTGACAAGGCAGATCTCGACCTGCATAACCGCATTACAAAAAAATAC ATCAGGGAAGTCGTAA Protein sequence : MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGLIDIPEKVRPFIFRPNVNYSN TDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRA LLSNINVEQMDEHAIEQDMMEIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQLADGDIIAASQQLFAALRNQQ QDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTLRCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGS ADALQLFDKSYHYWKRVLLLNPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNTALSLHSVDDFVSLSTSLAYS YSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENILAGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMT LIRNSNITSLQSIMLRSIRHINNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALKYAALNAMHLRDYTQALQYWQ RLEKVNGPTEPVTRQISTCITALQKNTSGKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviD | NP_458738.1 | Vi polysaccharide biosynthesis protein | Virulence | SPI-7 | Protein | 0.0 | 100 |
| tviD | NP_807943.1 | VI polysaccharide biosynthesis protein | Virulence | SPI-7 | Protein | 0.0 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tviD | NP_807943.1 | VI polysaccharide biosynthesis protein | VFG0429 | Protein | 0.0 | 100 |
