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Name : t4321 (t4321) Accession : NP_807917.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Unknown Product : capsid portal protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 4478556 - 4479602 bp Length : 1047 bp Strand : + Note : corresponds to STY4628 from Accession AL513382: Salmonella typhi CT18 DNA sequence : TTGATGAGTGAACACGACGCCCTGACCAGCACCGCGCCAGTGCAGGAGGCCGAACAGCAGAAGAATACAACTCACGCCGA AGCGTTCAGCTTTGGCGATCCGATCCCGGTACTGGACCGCCGCGAACTGCTGGACTATGTGGAATGCGTACAGATGGACA GATGGTATGAGCCGCCAGTAAGCTTTGACGGGCTGGCGCGAACCTACCGCGCCGCTGTGCATCACAGCTCACCGATAGCG GTTAAGCGTGACATTCTCAGCAGTACGTACATCCCGCACCGCCTGCTCAGCCAGCAGGCTTTTGCCCGTTTCGTCCAAGA TTATCTGGTGTTCGGTAACGCCTATCTGGAAAAGCGCACCAACCGGCTCGGCGGCGTTCTCTCACTGGAGCCAGCACTGG CGAAGTACACACGCCGTGGCTTGGACCTCGACACCTACTGGTTTGTGCAGTACGACCTGACCACGCAGCCCTATGAATTT ACACAGGGCAACATCTTTCACCTTATGGAGCCGGATATTAACCAAGAGATTTACGGGCTGCCCGGCTATCTCTCCGCCAT TCCGTCAACCCTGCTCAACGAGTCCGCAACGCTGTTCCGCCGGAAGTATTACATCAACGGCAGCCATGCGGGGTTCATCA TGTATATGACCGATGCAGCACAGAATCAGGAGGACGTGAACAATATCCGCCAGGCAATGAAAAGCGCCAAAGGGCCGGGC AACTTCCGCAACCTGTTTATGTACTCGCCCAATGGTAAAAAGGACGGCATCCAGATCATCCCGTTGTCGGAAGTTGCGGC AAAGGATGAGTTTCTTAACATCAAGAACGTTAGCCGCGATGACATGATGGCAGCGCACCGCGTGCCACCGCAGATGATGG GCATCATCCCCAACAATACCGGCGGCTTTGGTGATGTGGAAAAGGCCAGCCGCGTGTTTGTACGAAATGAATTAATACCC CTTCAAGAAAGGATTAAAGAACTCAATGAATGGTTAGGGGATGAAGTCATTAGATTTGCGAAATATACACTCGACGACAT AAGCTAA Protein sequence : MMSEHDALTSTAPVQEAEQQKNTTHAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIA VKRDILSSTYIPHRLLSQQAFARFVQDYLVFGNAYLEKRTNRLGGVLSLEPALAKYTRRGLDLDTYWFVQYDLTTQPYEF TQGNIFHLMEPDINQEIYGLPGYLSAIPSTLLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPG NFRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELIP LQERIKELNEWLGDEVIRFAKYTLDDIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 9e-165 | 100 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 9e-165 | 100 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 2e-91 | 56 |
