Gene Information

Name : t4319 (t4319)
Accession : NP_807914.1
Strain : Salmonella enterica Ty2
Genome accession: NC_004631
Putative virulence/resistance : Unknown
Product : major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4474736 - 4475800 bp
Length : 1065 bp
Strand : -
Note : corresponds to STY4625 from Accession AL513382: Salmonella typhi CT18

DNA sequence :
ATGAAAAAGAAAACCCGCTTTGCCTTTAACGCTTACCTGCAGCAGCTGGCGCGCCTGAATGGTGTGGATGTTGAAGAACT
CTCCAGCAAGTTCACCGTGGAGCCGTCCGTGCAGCAGACTCTGGAAGACCACATCCAGCAGTCTGCTGCTTTCCTGACGC
TGATTAACATCACGCCGGTCACTGAGCAGTCCGGTCAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACC
GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATACAAATGCGAGCAGACCAACTT
TGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCGAAATTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG
TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCCAACCGTGCTGAAAAC
CCGCTGCTGCAGGACGTCAATAAAGGCTGGCTGCAGAAAATCCGCGAAGACGCGCCGGATCACGTCATGGGCAGCAAAAC
CGCAGAAGACGGCACCACTACTGCAGAACCAGTAAAAGTAGGTCCGGGTGGTAAGTATGTAAATCTTGACGCGGTGGTGA
TGGATACCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGACGAGCTGGTTGTTGTCTGCGGACGTGAACTGCTG
TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAGAAAATCGCCGCCGATCTGATCATCAGCCAGAA
ACGCATGGGCGGCCTGCAGGCTGTGCGCGCGCCTTTCTTCCCGGCAAATGCCCTGCTGATCACCCGTCTGGATAACCTGT
CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCAGTTATCGACAACCCGAAACGCGACCGGATTGAAAACTTTGAATCC
GTCAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCGCTGGTAGAAAACATCGAAATCGGTGATTTCAGCGCGCC
TGCCGCACCGGAAAGTGGGGAATAA

Protein sequence :
MKKKTRFAFNAYLQQLARLNGVDVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT
DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDTVNELIDVEYQDDDELVVVCGRELL
SDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENIEIGDFSAPAAPESGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 7e-148 100
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 7e-148 100
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 2e-71 52