Gene Information

Name : t4278 (t4278)
Accession : NP_807876.2
Strain : Salmonella enterica Ty2
Genome accession: NC_004631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4444218 - 4444859 bp
Length : 642 bp
Strand : +
Note : corresponds to STY4584 from Accession AL513382: Salmonella typhi CT18

DNA sequence :
ATGGGGGATATTGTAACCAGGGAACAGGTGGCCAGTCTCATTACCCGGTATTTCAGTCAGCAGCTTTCAGATGACGAAAA
AGTGGCAGCCCTCAATCATTTTCGCCTGACACTTCATGAGCTCAGCCCCTTTGCCCGGGAGCCTGTGGACCTGGTGCTGT
GGGTGAAAGCCAGCGAAGTGGTGGCCAACGATTACAACCCCAATGTTATGGCTGCCGGAGAGAAAAAATTGCTGCAGCAC
TCACTGCAGGAGGACGGCTTTACCCAGCCCGTCGTTGTATCTGAAGAGAAAGGGCAGTACCTGGTCGTGGATGGTTTTCA
CCGGCAGTTGCTGGGCAGACGCGAGTCAGGAGCAGGAAAACGCCTGAAAGGCTGGTTGCCCGTCACCTGTATCAATCCCG
AACGAAAGGGGAAGGCTGAACGAATTGCCTCGACGATCAGGCATAACCGCGCCCGAGGGAAGCATCAGATAGCGTCGATG
TCAGATATTGTCAGAGACCTTGCCCGTCTCGGATGGGCAGATGAACGTATTGGCAAGGAGCTGGGAATGGACAGGGATGA
AGTTCTTCGTCTGAAGCAGATAAGTGGACTGACAGAATTATTTGAAGAAGAGGACTTCAGTCCGGCCTGGACGGTTCGCT
AA

Protein sequence :
MGDIVTREQVASLITRYFSQQLSDDEKVAALNHFRLTLHELSPFAREPVDLVLWVKASEVVANDYNPNVMAAGEKKLLQH
SLQEDGFTQPVVVSEEKGQYLVVDGFHRQLLGRRESGAGKRLKGWLPVTCINPERKGKAERIASTIRHNRARGKHQIASM
SDIVRDLARLGWADERIGKELGMDRDEVLRLKQISGLTELFEEEDFSPAWTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-97 100
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 7e-93 99
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-80 79
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 1e-80 79
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 1e-80 79
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-80 79
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-78 77
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-63 75
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-63 75
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-63 75
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 9e-29 47
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 5e-30 47
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 7e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
t4278 NP_807876.2 hypothetical protein VFG1505 Protein 9e-79 77