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Name : t4165 (t4165) Accession : NP_807769.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Virulence Product : type I secretion protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1566 EC number : - Position : 4310954 - 4312231 bp Length : 1278 bp Strand : + Note : corresponds to STY4457 from Accession AL513382: Salmonella typhi CT18 DNA sequence : ATGAATAGAAGACAAAGCGATCATCTCATGATGATAATTATTTCTTTGACGATCTTAATTATTATCCTTACCTACTTTAT AGAAATTAATTCAGTGGTTCATGGTCAGGGTGTTATCACTACTAAAGATAATGCTCAGTTAATATCTCTTTCTAAAGGAG GGACGATACAAGATATTTATGTGGCCGAGGGGGATACTGTAAAAAAAGGAGAACTCCTTGCAAAGGTCGTTAACTTTGAT CTGCAAAAAGAATATCAAAGGTATAGAACTCAAAAAGGGTATCTGGATAAAGATGTTAACGAAATATCTTTCATTCTTGA TAAAGAAAATGAGAGTGGATTGATTACCCTGGATGGCACCCGTTCTTTAAGCAACAAAGAGGTAAAAGCGAATATTGAAT TAGTGCATAGTCAGATAAGAGCTAAAGAGTTAAAAAAAACCTCTCTTGATTCTGAGATTAGCGGATTACAAGAGAAGCTA AGTTCGAAAGAAAAAGAACTAGCATTGCTTGCCGAAGAAATAAATATTCTTTCTCCACTGGTAAAAAAAGGAATTAGCCC ATATACCAATTTTCTTAACAAGAAACAGGCGTATATAAAAGTTAAGTCTGAAATTAATGATATTGAAAGTAGCATCACTT TAAAAAAAGATGATATTGAGCTGGTTGTTAATGATATTGAGGCGCTTAATAATGAATTGCGATTATCTTTATCTAAAATA ATATCTAAAAATCTTCAGGAACTTGAGGTTGTTAACTCTACATTAAAAGTAATAGAGAAGCAGATAAATGAGGAGGATAT CTATTCACCGGTTGACGGTGTAATTTATAAAATCAATAAAAGTGCCACTACTCATGGTGGTGTGATTCAGGCGGCGGACT TACTTTTTGAAATAAAACCAAAAGTAAGGACTATGCTGGCCGATGTGAAAATACTACCAAAATACCGTGACCAAATATAT GTAGATGAAGCCGTTAAGCTAGATGTCCAGTCAATTATTCAACCAAAGATAAAATCGTATAATGCGACTATCGATAATAT TAGCCCTGACTCTTATGAGGAAAATACCGGAGGAACAATTCAGCGTTATTATAAAGTAATTATTGCATTCGATGTTAATG AAGATGATTTACGGTGGTTAAAACCAGGTATGACTGTTGACGCCAGTGTAATTACCGGAAAACACAGCATTATGGAATAC CTGTTATCTCCTTTGATGAAAGGCGTGGACAAAGCCTTTTCAGAACCAGTTAATACTAAACGATTAGATACACCTTGA Protein sequence : MNRRQSDHLMMIIISLTILIIILTYFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFD LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKANIELVHSQIRAKELKKTSLDSEISGLQEKL SSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKI ISKNLQELEVVNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVKILPKYRDQIY VDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAFDVNEDDLRWLKPGMTVDASVITGKHSIMEY LLSPLMKGVDKAFSEPVNTKRLDTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4457 | NP_458557.1 | putative type-I secretion protein | Not tested | SPI-4 | Protein | 1e-175 | 100 |
| SC4139 | YP_219126.1 | membrane permease, cation efflux pump | Not tested | SPI-4 | Protein | 8e-175 | 99 |
| STM4260 | NP_463125.1 | cation efflux pump | Not tested | SPI-4 | Protein | 8e-175 | 99 |
| spi4_D | AAC26642.1 | HLYD family secretion protein | Virulence | SPI-4 | Protein | 6e-175 | 99 |
| siiD | CAE11796.1 | putative type-I secretion protein, putative inner membrane component | Virulence | SPI-4 | Protein | 6e-175 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| t4165 | NP_807769.1 | type I secretion protein | VFG0580 | Protein | 3e-175 | 99 |
