|
Name : t4164 (t4164) Accession : NP_807768.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Virulence Product : type I secretion protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1538 EC number : - Position : 4309650 - 4310957 bp Length : 1308 bp Strand : + Note : corresponds to STY4456 from Accession AL513382: Salmonella typhi CT18 DNA sequence : ATGAAGATTAAGATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCT AAGAGATTTAGTTAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTG ACTTAGATCTTTCACGGGCAGCACTTTATCCTACCCTGGATCTAACCTCTGGCCTTAATAATAACAGAAAGGAGTCGTCA GGTACCGAGAGAAACGTTGAAAATAAGGTATCTTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAG GAAATCTGAATACGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAA CCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAA ACTTTTTCGCTACTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAA TACCAGAAGTATTATGTATCAGTCGATGCTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTATCAC CAGATCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACTTATGGAC ATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCTGCGACCGAAGATATTAATGCCGCAAA ATCATCCTATTTTCCGACTGTAGATCTCGTTTCCAGCTATGTACAGAATAATCCGAGCGGTAGTGCCAAAAAAAGTGATT ATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTTAGAAATGCAGCCCAGGAAAGAAAA ATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTCTTGATTAAAACTCGTTATAACATTGATTCACAACT TTCAAAATACACCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTAT ATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTA AGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTT AAAAAGTGAGTTAAATGTAATGAAATGA Protein sequence : MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNAAQERK MVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV SMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4456 | NP_458556.1 | putative type-I secretion protein | Not tested | SPI-4 | Protein | 0.0 | 100 |
| siiC | CAE11795.1 | putative type-I secretion protein, putative outer membrane component | Virulence | SPI-4 | Protein | 0.0 | 99 |
| SC4138 | YP_219125.1 | ABC transporter outer membrane protein | Not tested | SPI-4 | Protein | 0.0 | 99 |
| STM4259 | NP_463124.1 | ABC exporter outer membrane component | Not tested | SPI-4 | Protein | 0.0 | 99 |
| spi4_C | AAC26641.1 | ABC exporter outer membrane component homolog | Virulence | SPI-4 | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| t4164 | NP_807768.1 | type I secretion protein | VFG0579 | Protein | 0.0 | 99 |
