|
Name : thiC (t3467) Accession : NP_807123.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3555807 - 3557702 bp Length : 1896 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCTACAACAACGTTAACCCGCCGCGAGCAGCGCGCTAAAGCCCAGCATTTTATCGATACGCTGGAAGGGACTGCCTT TCCCAACTCGAAACGCATCTACGTGACCGGTTCGCAGCATGATATTCGCGTACCGATGCGCGAAATTCAACTTAGCCCTA CGCTCATCGGCGGCAGTAAAGACAACCCGCAGTTTGAAGAGAACGAAGCCGTACCGGTATACGACACCTCCGGCCCCTAT GGCGATCCTGAAGTGGCGATTAACGTCCAGCAGGGTCTGGCGAAACTGCGCCAGCCGTGGATTGACGCACGTAACGATAG CGAAGAATTAGACGACCGTAGCTCGGCTTACACCAGAGAACGTCTGGCCGACGATGGCCTGGACGATCTGCGTTTTACCG GCCTGCTGACGCCGAAACGCGCTAAAGCGGGCAAGCGCGTCACCCAGTTACACTACGCCCGCCAGGGGATCGTCACTCCC GAAATGGAGTTCATCGCCATCCGTGAAAACATGGGCCGCGAGCGCATTCGCAGTGAAGTGCTGCGCCACCAGCATCCGGG CATGAACTTTGGCGCGCGCCTGCCGGAAAACATTACGCCGGAATTCGTGCGTGATGAAGTCGCCGCGGGCCGCGCGATTA TTCCCGCCAACATCAACCACCCGGAATCGGAGCCGATGATTATCGGCCGCAACTTCCTGGTCAAAGTGAATGCCAACATC GGTAACTCGGCGGTCACCTCCTCCATCGAAGAAGAGGTCGAGAAGCTGGTGTGGTCAACCCGCTGGGGCGCGGACACGGT GATGGACCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAATGGATCCTGCGTAACAGCCCGGTACCGATCGGCACCG TCCCGATCTACCAGGCGCTGGAAAAGGTCAACGGGATCGCCGAAGATCTCACCTGGGAAGCGTTCCGCGACACGCTGCTG GAGCAGGCCGAACAGGGCGTCGACTACTTCACCATCCACGCCGGCGTGCTGCTGCGCTACGTGCCGATGACCGCCAAACG CCTGACCGGTATTGTCTCGCGCGGCGGTTCGATCATGGCAAAGTGGTGTCTCTCCCATCACAAAGAGAACTTCCTGTTCG AACATTTCCGCGAGATTTGTGAAATCTGCTCCGCCTACGACGTTTCCCTGTCGCTGGGCGACGGCCTGCGCCCCGGCTCC ATTCAGGACGCCAACGACGAAGCGCAGTTCTCCGAGCTGCATACGCTGGGCGAGCTGACCAATATCGCCTGGGAATACGA CGTGCAGGTGATGATTGAAGGCCCGGGCCACGTGCCGATGCATATGATTCAGCGCAACATGACCGAAGAGCTGGAGAGCT GCCACGAAGCGCCGTTCTACACCTTAGGGCCGTTGACCACCGATATCGCGCCGGGCTATGACCACTTCACCTCTGGCATT GGCGCGGCGATGATCGGCTGGTTTGGCTGCGCGATGCTGTGTTACGTGACGCCGAAAGAGCATCTCGGCCTGCCGAACAA AGAAGATGTGAAGCAGGGGCTGATCACCTACAAAATCGCCGCCCACGCCGCGGATTTAGCCAAAGGACATCCGGGCGCGC AGATCCGCGATAACGCCATGTCGAAAGCGCGCTTTGAATTCCGCTGGGAAGATCAGTTTAACCTCGCGCTCGACCCGTTC ACCGCCCGCGCTTATCACGATGAAACCCTGCCGCAGGAGTCCGGTAAGGTCGCCCACTTCTGTTCCATGTGTGGGCCGAA GTTCTGCTCAATGAAAATCAGCCAGGAAGTGCGTGATTACGCCGCCGCGCAAGCCATTGAAGTCGGCATGGCGGATATGT CGGAGAACTTCCGCGCCAAAGGCGGCGAAATTTATCTCAAACGGGAGGAAGCCTGA Protein sequence : MSTTTLTRREQRAKAQHFIDTLEGTAFPNSKRIYVTGSQHDIRVPMREIQLSPTLIGGSKDNPQFEENEAVPVYDTSGPY GDPEVAINVQQGLAKLRQPWIDARNDSEELDDRSSAYTRERLADDGLDDLRFTGLLTPKRAKAGKRVTQLHYARQGIVTP EMEFIAIRENMGRERIRSEVLRHQHPGMNFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLL EQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKENFLFEHFREICEICSAYDVSLSLGDGLRPGS IQDANDEAQFSELHTLGELTNIAWEYDVQVMIEGPGHVPMHMIQRNMTEELESCHEAPFYTLGPLTTDIAPGYDHFTSGI GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPF TARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQAIEVGMADMSENFRAKGGEIYLKREEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
