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Name : t3416 (t3416) Accession : NP_807079.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Unknown Product : capsid portal protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 3512586 - 3513623 bp Length : 1038 bp Strand : - Note : corresponds to STY3674 from Accession AL513382: Salmonella typhi CT18 DNA sequence : ATGGGAAAGCGTAAGAAAAACCGCGCAGCGGCGATGAATCAGATCCAGCATAAAAGCCAGACTTCAGCCGAAGCATTCAG CTTCGGCGATCCCGTTCCTGTTCTGGACCGCCGCGAATTACTGGACTATGTGGAATGCGTACAGATGGACCGCTGGTATG AGCCACCAGTGAGTTTCGACGGACTGGCGCGAACCTTCCGCGCCGCCGTGCATCATAGCTCACCGATTGCGGTGAAATGC AACATTCTGACCAGCACCTACATCCCTCACCCGCTGCTCAGCCAGCAGGCTTTTTCACGTTTTGTGCAGGACTATCTGGT ATTTGGTAACGCCTACCTGGAGAAACGCACGAACCGGTTCGGTGAAATTATCGCCCTTGAGCCTGCTCTGGCAAAATACA CCCGACGCGGGTTAGACCTGGATACCTACTGGTTTGTGCAATACGGTATGACAACCCAGCCGTATCAGTTCACGAAAGGC AGCATCTTTCATCTGATGGAACCCGATATCAACCAGGAGATCTACGGCCTGCCCGGCTATCTTTCTGCCATTCCGTCAGC CCTGCTCAACGAGTCCGCCACGCTGTTCCGACGCAAATATTATATTAATGGCAGCCATGCAGGATTCATAATGTACATGA CCGATGCCGCTCAGAACCAGGAGGATGTGAACAACCTCCGCAACGCGATGAAAAGCGCCAAAGGTCCGGGCAACTTCCGC AACCTGTTTATGTACTCGCCTAACGGCAAAAAGGACGGGCTTCAGATCATCCCGCTGTCAGAAGTGGCGGCAAAGGATGA GTTTCTGAACATCAAGAACGTAAGCCGGGACGACATGATGGCGGCGCATCGTGTGCCACCGCAAATGATGGGGATTATGC CGAATAATGTTGGGGGGTTTGGGGATGTGGAGAAGGCAAGCCGTGTATTCGTCCGAAATGAGCTAATGCCACTACAAAAG CGATTACAGGAGATGAATGATTGGCTTGGCAAGGAGGCGATACAGTTTAATACCTACTCGCTAGATATAGTCCCATAA Protein sequence : MGKRKKNRAAAMNQIQHKSQTSAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKC NILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEIIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFR NLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKASRVFVRNELMPLQK RLQEMNDWLGKEAIQFNTYSLDIVP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 3e-144 | 86 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 3e-144 | 86 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 2e-88 | 54 |
