Gene Information

Name : spaT (t2788)
Accession : NP_806489.1
Strain : Salmonella enterica Ty2
Genome accession: NC_004631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2868755 - 2869252 bp
Length : 498 bp
Strand : -
Note : corresponds to STY3009 from Accession AL513382: Salmonella typhi CT18

DNA sequence : 
ATGGATTATCAAAATAATGTCAGCGAAGAACGTGTTGCGGAAATGATTTGGGATGCCGTTAGTGAAGGCGCCACGCTAAA
AGACGTTCACGGGATCCCTCAAGATATGATGGACGGTTTATATGCTCATGCTTATGAGTTTTATAACCAGGGACGACTGG
ATGAAGCTGAGACATTCTTTCGTTTCTTATGCATTTATGATTTTTACAATCCCGATTACACCATGGGACTGGCGGCGGTA
TGCCAACTGAAAAAACAATTTCAGAAAGCATGTGACCTTTATGCAGTAGCGTTTACGTTACTTAAAAATGATTATCGCCC
CGTTTTTTTTACCGGGCAGTGTCAATTATTAATGCGTAAGGCGGCAAAAGCCAGACAGTGTTTTGAACTTGTCAATGAAC
GTACTGAAGATGAGTCTCTGCGGGCAAAAGCGTTGGTCTATCTGGAGGCGCTAAAAACGGCGGAGACAGAGCAGCACAGT
GAACAAGAAAAGGAATAA

Protein sequence : 
MDYQNNVSEERVAEMIWDAVSEGATLKDVHGIPQDMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFYNPDYTMGLAAV
CQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQCQLLMRKAAKARQCFELVNERTEDESLRAKALVYLEALKTAETEQHS
EQEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 6e-73 100
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 6e-73 100
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 6e-73 100
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 6e-73 100
sycB AAS66850.1 SycB Not tested SSR-1 Protein 4e-34 55
sicA AAS66869.1 SicA Virulence SSR-2 Protein 6e-28 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaT NP_806489.1 hypothetical protein VFG0547 Protein 2e-73 100
spaT NP_806489.1 hypothetical protein VFG0988 Protein 4e-44 60
spaT NP_806489.1 hypothetical protein VFG2451 Protein 7e-46 60
spaT NP_806489.1 hypothetical protein VFG1769 Protein 3e-40 52