|
Name : t2647 (t2647) Accession : NP_806358.2 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2735034 - 2736233 bp Length : 1200 bp Strand : + Note : similar to Yersinia pestis prophage integrase (CAC89942) DNA sequence : TTGGCAAGAACGACACGCCCCCTGACCAACACAGAAGTACTGCGCGCTAAAGCGTTAGAAAAGGATCTAACGTTGCATGA TGGCGATGGTCTTTTTCTACTCGTTAAAACGAACGGTAAGAAGTTATGGCGTTTCCGTTATCAACGTCCGGCAACAAAGC AGCGGACAATGATGGGGCTAGGTACCTTCCCAGCTCTTTCACTTGCTGACGCCCGACGGTTAAGAGCGGATTACCTTTCC TTGTTAGCCAACGGAATTGACCCGCAAATTCAAGCTGAAATTGCAGAGGAACAGCAGCAAATCGCACAGGACAGTATTTT TACAACGGTCGCCGCTAACTGGTTCCAGCTTAAAAGCAAAAGCGTAACCCCTGATTACGCAAGAGACATTTGGCGCTCAT TGGAGAAAGATGTATTCCCTGCCGTTGGTGAACTCCCAGTTCAGCAAATCAAAGCCCGAACGTTGGTTGAAGCGCTTGAG CCAGTCAAAGCTCGTGGGGCGCTAGAGACTGTACGTCGGCTAGTGCAACGCATTAACGAGATAATGATCTTTGCCGTAAA TACAGGGCTGATCGATGCCAATCCAGCTTCCGGGGTTGGAATGGCCTTTGAGAAGCCAAAAAAGCAAAACATGCCAACAC TACGACCAGAAGAACTACCAAATCTAATGCGTTCTTTAGCCATGTCTAATTTATCTGTATCGACTCGCTGCCTTATCGAA TGGCAGCTTCTAACACTTGTACGCCCTTCTGAAGCCTCTGGTACTCAATGGGCAGAGATCGATCTTGAGAATAAACTCTG GACGATCCCTGCAGGACGAATGAAAGCCAAGCGAGAACATATTGTTCCTCTGTCGGTTCGAGCATTAGATATTTTAGAGA TAATGAAGCCTATTAGTGCACATCGTGAATATGTTTTCCCAAGTAGAAATAATCCTAAGCAACCAATGAATAGTCAGACA GCTAATGCTGCATTAAAAAGAATTGGTTATGGAGGAAAGCTTGTTGCACATGGTTTGCGTTCTATAGCCAGTACAGCTAT GAATGAGGAAGGTTTTAATCCCGATGTTATTGAAGCAGCATTAGCGCATAGCGATAAAAATGAAGTCCGTAAAGCATATA ATCGTTCGACTTACCTTTATCAACGAATTGATTTAATGAATTGGTGGGCTAACTTCGTGTTTAAAAAAACACACGAATAG Protein sequence : MARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLLVKTNGKKLWRFRYQRPATKQRTMMGLGTFPALSLADARRLRADYLS LLANGIDPQIQAEIAEEQQQIAQDSIFTTVAANWFQLKSKSVTPDYARDIWRSLEKDVFPAVGELPVQQIKARTLVEALE PVKARGALETVRRLVQRINEIMIFAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPNLMRSLAMSNLSVSTRCLIE WQLLTLVRPSEASGTQWAEIDLENKLWTIPAGRMKAKREHIVPLSVRALDILEIMKPISAHREYVFPSRNNPKQPMNSQT ANAALKRIGYGGKLVAHGLRSIASTAMNEEGFNPDVIEAALAHSDKNEVRKAYNRSTYLYQRIDLMNWWANFVFKKTHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 1e-96 | 53 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 2e-99 | 52 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 2e-99 | 52 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 2e-99 | 52 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 3e-99 | 52 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 3e-99 | 52 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 9e-83 | 47 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-82 | 47 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-82 | 47 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 4e-61 | 41 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 2e-61 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| t2647 | NP_806358.2 | hypothetical protein | VFG1092 | Protein | 7e-83 | 47 |
