Gene Information

Name : safB (t2559)
Accession : NP_806280.1
Strain : Salmonella enterica Ty2
Genome accession: NC_004631
Putative virulence/resistance : Virulence
Product : periplasmic fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2637504 - 2638244 bp
Length : 741 bp
Strand : -
Note : corresponds to STY0335 from Accession AL513382: Salmonella typhi CT18

DNA sequence : 
ATGAAAATTATTAGTTTTGGTGTAATGGCGGCTGTTTTATTCGTCTCTAATTCTATAACTCCTCCAGTGTATGCCGCTGA
GCAGAAATTAAGTTTAAACACTAAATCATTCAGCGTGAAGCTGGGGGCTACACGGGTGATTTATCACGCTGGTACAGTTG
GAGCCACGCTCTCGGTGAGCAACCCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCG
CCTGCTCCTTTTTTGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGG
TGGTGACATGCCAACGGATCGTGAGACTTTACAGTGGGTCTGTGTAAAGGCGGTACCACCCGAAAATGAACCGTCGGATA
CACAGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATCAACGTCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTG
AAGGGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGGCGGGCAACAAACTTAAGGTGGAGAACCCCACCCC
GTTTTACATGAATTTAGCCTCCGTCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCTTTTGCTGACA
AAACACTAAATATGCCAGGTAGTGCCCATGGTGATGTCGAGTGGAGAGTTATTACTGACTTTGGTGGTGAAAGTCATCCG
TTCCACTACGTCCTTAAATAA

Protein sequence : 
MKIISFGVMAAVLFVSNSITPPVYAAEQKLSLNTKSFSVKLGATRVIYHAGTVGATLSVSNPQNYPILVQSSVKAADKSS
PAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAV
KGTPEDVAGNLRWVEAGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSAHGDVEWRVITDFGGESHP
FHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 5e-114 100
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-54 47
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-54 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
safB NP_806280.1 periplasmic fimbrial chaperone protein VFG0943 Protein 9e-52 52
safB NP_806280.1 periplasmic fimbrial chaperone protein VFG0850 Protein 6e-55 50
safB NP_806280.1 periplasmic fimbrial chaperone protein VFG0858 Protein 6e-52 50
safB NP_806280.1 periplasmic fimbrial chaperone protein VFG0852 Protein 5e-53 49