Gene Information

Name : fimC (t2318)
Accession : NP_806052.1
Strain : Salmonella enterica Ty2
Genome accession: NC_004631
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2383126 - 2383818 bp
Length : 693 bp
Strand : -
Note : corresponds to STY0592 from Accession AL513382: Salmonella typhi CT18

DNA sequence : 
ATGCTGAATAGTATAAAATTAGGATTTATTGTTCTTCTCACGTTATTTACTTCGCTGAACGTACAGGCGGCGGGGGGGAT
TGCATTAGGCGCCACGCGTGTTATTTATCCCTCGGCGGCGAAACAGACTTCTCTGGCAATCAGTAATAGCGATACTCAAG
AACGTTACCTCGTCAATTCATGGATCGAAAATAACGCTGGGCAGAAAGAAAAAACGTTTATCGTTACGCCGCCTTTATTC
GTCAGCGAGCCCAAAAGTGAAAACACGCTGCGTATTATCTACGCCGGGCAACCGCTACCCGAGGATCGGGAGTCGTTATT
CTGGATGAACGTGAAAGCCATCCCGTCGGTCGATAAAAGTCATATTGAAGGAAAAAACGTTCTGCAACTGGCGATTCTGT
CGCGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCGCAGACGCCGGAAGACGCGCCGACCTTGCTGAAATTTTCCCGT
GTCGGCAACCATCTCAAGATAACCAACCCATCTGCTTATTACCTCACGCTGGTCAATATCAGCGTGGGTGCGAAAAAGAT
TGATAACGTGATGATCGCGCCAAAAAGCGACATGCAAATTCCCTTACCGACTGGCGCGCAGGGCAGCGTGACATTTCAGA
CCGTCAATGATTACGGCGCATTGACGTCGGCGACAACAGCCAGTCTCGGTTAA

Protein sequence : 
MLNSIKLGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIENNAGQKEKTFIVTPPLF
VSEPKSENTLRIIYAGQPLPEDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAPTLLKFSR
VGNHLKITNPSAYYLTLVNISVGAKKIDNVMIAPKSDMQIPLPTGAQGSVTFQTVNDYGALTSATTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-48 51
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimC NP_806052.1 fimbrial chaperone protein VFG0445 Protein 3e-103 99
fimC NP_806052.1 fimbrial chaperone protein VFG1644 Protein 9e-49 51
fimC NP_806052.1 fimbrial chaperone protein VFG0911 Protein 7e-49 50
fimC NP_806052.1 fimbrial chaperone protein VFG0875 Protein 2e-53 49
fimC NP_806052.1 fimbrial chaperone protein VFG0455 Protein 5e-41 42