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Name : hofB (t0149) Accession : NP_804032.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 169457 - 170842 bp Length : 1386 bp Strand : - Note : corresponds to STY0165 from Accession AL513382: Salmonella typhi CT18 DNA sequence : ATGAAAGACGCTCAGCTCAACACCTTGTGTCAACGTCATCAGGCTGTACTGATCAATAGCGCCAGCAACAGTATCACTGT TGCGGTGGTCGACGCGCCCTCTCATGCGTTATTGGACGCTCTGCATTTCGCCACGCAAAAACAGATTGATATTGTGTGCT GGACTCGCCAGCAAATGGAAAATCATCGGCATAAGCCGGATCAGGCACCCTCGACAAACGCCGCGAAAGGCGGAGAAACC GCGGCCCAGCTTCTCAATCAGACATTACGCTCGGCGATGGCGAAACGCGCCTCTGATATCCATCTCGAACCCGGCGCCAG CCGCTACCGGATAAGGCTCCGCATCGATGGCGTTCTTCATATTCTGCAGGACATCGCCAAAGAGACGGGGCTTGCGCTGA CGGCCAGATTGAAAGTCCTAGGAAATTTGGACATCGCTGAACATCGGCTGCCGCAGGACGGGCAATTTACCGTTGACCTG ACGGGCGACAGCATCTCTTTTCGTATCGCCACGCTTCCCTGTAAAGAAGGCGAAAAAGTCGTCTTACGGTTGTTGCATCA GGTTGAACAAACGCTGGATCTGGACACGCTGGGCATGTACGGGGCACAACTTACCGCTTTTAGACAAGCCCTACAGCAAC CTCAGGGGCTGGTACTGGTGACTGGCCCCACCGGTAGCGGAAAAACGGTCACGCTATACAGCGCGCTACAAACCCGGAAT ACGCCGGGTATCAACCTCTGTAGCGTTGAGGATCCGATAGAAATTCCACTGGATGGGATTAACCAGACGCAGATCCATCC CCGCGCCGGGCTCACCTTTCAAAATGTGCTGCGCGCGCTTTTACGCCAGGACCCTGACATCATCATGGTAGGTGAAATTC GTGACGGCGACACCGCAGAAATCGCCATTAAGGCGGCACAAACGGGCCATCTGGTACTTTCAACACTCCATACGAACTCC ACCAGCGAAACCCTGATACGTTTGCAGCAAATAGGCGTAACACGCTGGATGATCTCATCGGCGCTTACGCTGGTGGTAGC GCAACGCCTGGTAAGGAAGCTTTGCCCGCACTGCAAACAGCGTCTGAGCGATCCCGTGGTGCTATCGCCCAATCTTTGGC CCAGCGCGCTACCGCGCTGGCAGGCAAACGGCTGTCAGCATTGCTACCACGGCTTTTATGGCCGAACCGCGTTATTCGAA GTGTTAACCGTTACCCCGGCATTACGTCAGTTAATTGCGAGCGGCGCATCGGCGCAAGCACTGGAAGCCCACCTCCAGCA GACCGGTACAGGGACGCTTTTTGAAAATGGCTGTCGCGCCGTTGAGCAAGGCATGACGTCCTTTGAAGAGATACTGCGCG TTCTGGGAATGCCCCATGAGCGTTAA Protein sequence : MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQIDIVCWTRQQMENHRHKPDQAPSTNAAKGGET AAQLLNQTLRSAMAKRASDIHLEPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDL TGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRN TPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNS TSETLIRLQQIGVTRWMISSALTLVVAQRLVRKLCPHCKQRLSDPVVLSPNLWPSALPRWQANGCQHCYHGFYGRTALFE VLTVTPALRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEEILRVLGMPHER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-69 | 45 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-69 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | NP_804032.1 | hypothetical protein | VFG2048 | Protein | 5e-71 | 46 |
| hofB | NP_804032.1 | hypothetical protein | VFG2426 | Protein | 3e-70 | 44 |
| hofB | NP_804032.1 | hypothetical protein | VFG0182 | Protein | 8e-73 | 44 |
| hofB | NP_804032.1 | hypothetical protein | VFG1876 | Protein | 5e-74 | 44 |
| hofB | NP_804032.1 | hypothetical protein | VFG0112 | Protein | 9e-77 | 44 |
