|
Name : ssaT (t1289) Accession : NP_805092.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 1354061 - 1354840 bp Length : 780 bp Strand : + Note : corresponds to STY1699 from Accession AL513382: Salmonella typhi CT18 DNA sequence : ATGACACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTTTCTTTATTACTTCC TCTATTAAAAAGTGGCAGTTTAGGGGCCGCGCTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG CGCGACAATGGGTACGATATTCAATTCTACAATGGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTTTTGT GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATACCAATATTTACCGCCAGGG CGTACTTTATTATTTGATCGGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGCATCAGCTT CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTAGTTCTACTAACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC TATTTGGTTGAAAGCGATAAGTTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA Protein sequence : MTQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTMEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG RTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH YLVESDKFYIYLKDWFPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-99 | 100 |
| ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 2e-99 | 100 |
| ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 6e-98 | 99 |
| ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 6e-98 | 99 |
| ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 9e-98 | 99 |
| YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 3e-45 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssaT | NP_805092.1 | type III secretion protein | VFG0521 | Protein | 4e-98 | 99 |
