Gene Information

Name : ssaO (t1284)
Accession : NP_805087.1
Strain : Salmonella enterica Ty2
Genome accession: NC_004631
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1351401 - 1351778 bp
Length : 378 bp
Strand : +
Note : corresponds to STY1704 from Accession AL513382: Salmonella typhi CT18

DNA sequence : 
ATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCAGCAAACTTACCGTGCTTGATCAGCAGCAACA
GGCGATTATTACTGAACAGCAGATTTGCCAGACGCGCGCTTTAGCAGTGACTACCAGACTGAAAGAATTAATGGGCTGGC
AAGGTACGTTATCTTGTCATTTATTGTTGGATAAGAAACAACAAATGGCCGGACTATTCACTCAGGCGCAGAGCTTTTTG
ACGCAACGGCAGCAGTTAGAGAATCAGTATCAGCAGCTTGTCTCCAGGCGAAGCGAATTACAGAAGAATTTTAATGCGCT
TATGAAAAAGAAAGAAAAAATTACTATGGTATTAAGCGATGCGTATTACCAAAGTTGA

Protein sequence : 
METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaO NP_456112.1 putative type III secretion protein Virulence SPI-2 Protein 1e-36 100
ssaO NP_805087.1 type III secretion protein Virulence SPI-2 Protein 1e-36 100
ssaO CAA70538.1 secretion system apparatus Virulence SPI-2 Protein 1e-36 99
ssaO NP_460381.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-36 99
ssaO YP_216424.1 secretion system apparatus protein SsaO Virulence SPI-2 Protein 1e-36 99
ssaO AAX49618.1 SsaO Virulence SPI-2 Protein 8e-31 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaO NP_805087.1 type III secretion protein VFG0516 Protein 4e-37 99