Gene Information

Name : SPs1290 (SPs1290)
Accession : NP_802552.1
Strain : Streptococcus pyogenes SSI-1
Genome accession: NC_004606
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1275624 - 1276310 bp
Length : 687 bp
Strand : -
Note : similar to GB:AAK33767.1 (AE006534) percent identity 99 in 228 aa

DNA sequence : 
ATGCAATTATCAAATATTGTGAAGAGCTATCAAAATGGGGATCAAGTTCTTCAAGTTTTGAAAGGTATTAATTTAACAGT
ATATGAGGGTGAATTTTTAGCTATTATGGGTCCGTCTGGTTCGGGAAAATCAACACTAATGAATATTATTGGTTTATTAG
ATCGGCCAACATCCGGAGATTACACATTACATAATACTAAAATAGAAATCCTTAATGATCGTGAATTAGCAAAAGTACGA
AATGATGAAATCGGCTTTGTCTTTCAACAATTCTTTCTGTTAGCTAAATTAACTGCATTACAAAATGTTGAGTTGCCTCT
TATTTATGCTGGTGTAAACGTCTCAAAAAGACGTGAACAGGCTAAGCAATTTCTTGAAAAAGTAGGACTTGGACGACGTA
TCAAACATCTACCGTCAGAACTGTCAGGAGGTCAAAAGCAAAGGGTGGCTATCGCACGAGCTTTAGTAAATGACCCATCT
ATTATTTTAGCGGATGAACCAACAGGTGCACTAGATACTAAAACAGGTCAGCAAATTATGGAACTCTTGACAGAGTTAAA
CAAAGAAGGTAAAACAATTATTATGGTTACTCATGAACCAGAAATTGCTGATTTTGCAACTCGGAAAATTATTATTCGTG
ATGGTGATATCACAACGGATACTACAGCTAGTGTTGTTATTGACTAG

Protein sequence : 
MQLSNIVKSYQNGDQVLQVLKGINLTVYEGEFLAIMGPSGSGKSTLMNIIGLLDRPTSGDYTLHNTKIEILNDRELAKVR
NDEIGFVFQQFFLLAKLTALQNVELPLIYAGVNVSKRREQAKQFLEKVGLGRRIKHLPSELSGGQKQRVAIARALVNDPS
IILADEPTGALDTKTGQQIMELLTELNKEGKTIIMVTHEPEIADFATRKIIIRDGDITTDTTASVVID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-33 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-33 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPs1290 NP_802552.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-74 75
SPs1290 NP_802552.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-44 49
SPs1290 NP_802552.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-35 45
SPs1290 NP_802552.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPs1290 NP_802552.1 ABC transporter ATP-binding protein VFG0869 Protein 2e-28 43