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Name : VPA0511 (VPA0511) Accession : NP_800021.1 Strain : Genome accession: NC_004605 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis protein Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 516211 - 518082 bp Length : 1872 bp Strand : - Note : similar to GB:AAF95306.1 (AE004288) percent identity 62 in 623 aa DNA sequence : ATGAAATTCAGACATAAGGTTGTCACCGCCTCTTCAATTTTGCTGCTAATTACTGTGTCGCTACTATCGACGCAACAAGT TATGACGATTCGTTCTCAAACTCAGGAGCACATCAATTCAAGCGTTAAAGAGATTTTGACCAGCGTGAGCAACACCGTTC AATCTGAAATGAACGCGAAGAAAGATCTCGCACGCTCGATCACAGAGATTATTGAACTATCGCCAAACGACCGCACATAC GTAAAAGACATTCTTGAGAAGCCAACTCCGAAATCAAGCTTCCTAGCGATTGGTTTTGGTTATGAAAGTAATGGCTACGT GATTGAAAACGACGACGGTTGGGATGCAGGGCCTGATTATGATCCTCGCCAACGCCCTTGGTTTATCGCAGCCAAAAACA AAGGCGATTTGGTGGTTACCGACCCTTATGTTGATGCATCATCTAAGAATGTGATCATCTCTGTTGGTACGCCAGTAAAA CAAAACGGCCAGTTCTTGGCGGGCATGTTTTACGACCTAGAGCTAACTACCCTTTCCGACCTAGTTAACCAAGTGAACCT GTTTGATGCTGGTTACTTGTTCTTAGTCACTGACGATGGTACGACGATTGCGCACCCGCAAAGTAAGTACAACGGTGAAA AGCTCAATAGCTACCTACCGCAAGTTGACCTAAATAAGGCGACTCAACACATCGAAGTTGATAACAATCCTTACATGGTT AGCCTTACTCATATCCCAAGTGAGAACTGGTACGTGGGCGCAATCATTGATGAAACGGCAGCTTACTCAGTGGTTGGAGA GCTACGTAATAGCGCGATCATTTACTCAATCATCGCTGTACTTGCTTCAGTTATCGCATTAACACTTCTGATCAGAACCC TAATGCGCCCGCTAGATACACTAAACACGGCAATTAAAGACGTCGCATCTGGCAAAGGTGATTTAACGCAACGCCTAGAA ACTGACACCGATCAGGAGTTTTCTGAGCTAGCGAAAAACTTCAACACCTTCATGGAAAATCTTCAGCAGCAGATCATTGA ATCGAAATCTATCTCTGATCAGATTCTTACTGGCACTCAAATCACGGCAGAAGGCGCACGCGACTCCGCTGGTGCCATTC AAACTCAGCTTCAAGAATTGGAGCAACTGGCAACCGCAATGCACGAAATGTCTGTCACCGCGACAGAAGTTGCGAACAAC GCACAAGGCGCCGCAAGCGCTGCGAAAGAAGCCGATCAAGCAACCATTGAAGGTTCATCAGTGGTGAGCGAATCAACACA AACCATTAATATGCTCTCAGACAGCATCGATTTGGCTGTTGAAGAAGTTCAAGTGTTAGAGTCAGCAACAGCAAACATCG AAACGATTCTTAAAGTTATCAACGATATTGCAGACCAAACCAACCTACTTGCATTGAATGCTGCAATCGAGGCTGCACGC GCAGGTGAATCTGGTCGTGGTTTTGCTGTAGTGGCCGATGAAGTTCGCACACTGGCACAACGTACACAGGAATCGACAAC AGAAATTCGCAGCATGATTGAACAGCTACAATCTGGTGCTTCTTCGGTGGCAAGCGCAATGCATCAAAGCAAAGGCAGTG CTGTAGAAGCGGTAGAAAAAGCCGATTTGGCGAATGATGCGCTACAACGCATTCGTGATGCGATTCAACGCATCTCAGAC ATGAACTTGCAAATCGCCTCTGCGGCAGAAGAGCAAAGCCTTGTTGCGGAAGAAATCAACAACAACACGGTCAATATTAA AGACCTATCCACTCAAGTTGCTGATTCTGCAAACCGCACTAACGAAGCGATGCAATCTCAACACGACAATGTACGCAAAC AGGATGAAATCCTAAATCGCTTTACGGTTTAG Protein sequence : MKFRHKVVTASSILLLITVSLLSTQQVMTIRSQTQEHINSSVKEILTSVSNTVQSEMNAKKDLARSITEIIELSPNDRTY VKDILEKPTPKSSFLAIGFGYESNGYVIENDDGWDAGPDYDPRQRPWFIAAKNKGDLVVTDPYVDASSKNVIISVGTPVK QNGQFLAGMFYDLELTTLSDLVNQVNLFDAGYLFLVTDDGTTIAHPQSKYNGEKLNSYLPQVDLNKATQHIEVDNNPYMV SLTHIPSENWYVGAIIDETAAYSVVGELRNSAIIYSIIAVLASVIALTLLIRTLMRPLDTLNTAIKDVASGKGDLTQRLE TDTDQEFSELAKNFNTFMENLQQQIIESKSISDQILTGTQITAEGARDSAGAIQTQLQELEQLATAMHEMSVTATEVANN AQGAASAAKEADQATIEGSSVVSESTQTINMLSDSIDLAVEEVQVLESATANIETILKVINDIADQTNLLALNAAIEAAR AGESGRGFAVVADEVRTLAQRTQESTTEIRSMIEQLQSGASSVASAMHQSKGSAVEAVEKADLANDALQRIRDAIQRISD MNLQIASAAEEQSLVAEEINNNTVNIKDLSTQVADSANRTNEAMQSQHDNVRKQDEILNRFTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 8e-103 | 47 |
