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Name : VPA1748 (VPA1748) Accession : NP_801258.1 Strain : Genome accession: NC_004605 Putative virulence/resistance : Resistance Product : chloramphenicol acetyltransferase Function : - COG functional category : R : General function prediction only COG ID : COG0110 EC number : - Position : 1869943 - 1870602 bp Length : 660 bp Strand : + Note : similar to GB:AAF61918.1 (AF227506) percent identity 54 in 218 aa DNA sequence : ATGAGTGTTTTCGACACGTGGTTAAAAGGTCAAGTCATTAAAGATCACATCACTAATCCCAATATCATCGTTGGCGATTA CAGCTATTACTCGGGCTTCTATCATCAAAAAAGCTTCGAAGAGCAACCGGTACGCTACTTGTTGGGTGACCCCGTCACAC TTCAAGAATGGCAAAGTAGAGAACCCGATAGCATCGACAAATTAATCATTGGCAAGTTTTGTTCCATCGCTTCTGGAGCC ACCTTCATGATGGCAGGAAACCAAGGTCATCGCATTGACTGGATTTCGACCTTCCCCTTCTCTCCTGAAGAATTTGGAGA AGGCGTACAAGATGGTTTCGAGCGTGCCGGAGACACAGTGGTGGGGAACGATGTTTGGATTGGCAGCGAGGCGATGATCA TGCCCGGAGTAAACATCGGCGATGGAGCCGTCATCGGAGCACGCACCGTAGTGACGAAAGACGTGCAACCTTATTCGGTG GTGGTTGGAAACAACCAAGTCGTACGTCAACGATTCAGCGATAAAGAGATTGAAACTCTACTCAATATCCAATGGTGGAA CTGGCCAATAGAACACATTAAACAAGCAATGAAAGTAATGTGTAGCAGCCAAGTCGGTGCGCTTGCGGATTACTATCAAG AGCACATTGTCGATTTGTAG Protein sequence : MSVFDTWLKGQVIKDHITNPNIIVGDYSYYSGFYHQKSFEEQPVRYLLGDPVTLQEWQSREPDSIDKLIIGKFCSIASGA TFMMAGNQGHRIDWISTFPFSPEEFGEGVQDGFERAGDTVVGNDVWIGSEAMIMPGVNIGDGAVIGARTVVTKDVQPYSV VVGNNQVVRQRFSDKEIETLLNIQWWNWPIEHIKQAMKVMCSSQVGALADYYQEHIVDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| catB8 | YP_005797132.1 | chloramphenicol acetyltransferase | Not tested | AbaR4e | Protein | 8e-42 | 54 |
| catB3 | AET25385.1 | chloramphenicol acetyltransferase | Not tested | PAGI-2(C) | Protein | 9e-41 | 53 |
| catB3 | AFG30108.1 | chloramphenicol acetyltransferase | Not tested | PAGI-2 | Protein | 9e-41 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | JF268688.1.gene6.p01 | Protein | 2e-40 | 55 |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | AY123251.gene2.p01 | Protein | 3e-42 | 54 |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | AF322577.2.gene4.p01 | Protein | 5e-41 | 53 |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | AY740681.1.gene5.p01 | Protein | 5e-41 | 53 |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | NC_002516.2.878374.p | Protein | 7e-39 | 49 |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | CP001581.1.gene990.p | Protein | 6e-44 | 45 |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | NC_011586.7045146.p0 | Protein | 3e-24 | 44 |
| VPA1748 | NP_801258.1 | chloramphenicol acetyltransferase | AM180355.1.gene2499. | Protein | 3e-28 | 41 |
