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Name : VPA1667 (VPA1667) Accession : NP_801177.1 Strain : Genome accession: NC_004605 Putative virulence/resistance : Unknown Product : PTS system glucose-specific transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : - Position : 1786945 - 1788387 bp Length : 1443 bp Strand : + Note : similar to GB:AAL20132.1 (AE008752) percent identity 55 in 480 aa DNA sequence : ATGTTTGCAAGTATATTTGGACAACTACAAAAAATAGGGCGGTCGTTGATGCTGCCTGTAGCGGTGTTACCGGTGGCCGG CTTGATGCTGGGTATTGGTAATGCGGGTTTTGGGTTTATTCCAGACGCGGTCAACAAAGTGATGCTCGCCGCCGGCGAAG GCGTATTCGGCAACATGCAGTTGATGTTTGCGGTCGGTGTGGCGCTCGGGTTATCAAAAGGCAATGACGGTGCGGCTGCG CTCGCTGGCTTAGTTGGCCTAATTATTATGAACGCATCGCTCGGTATTGTGACAGGCCTGCGCGGCCTAGAAACTGACGC CACCATAATGGGCGTTGAGACGCTACAAACCGGGGTGTTTGGCGGCATCTTTATCGGTGCGGTCGCGGCAATCATGTACA ACCGCTTCTACAACATCAAACTGCCGGAATATTTGGGCTTCTTCGCGGGTAAGCGATTTGTGCCCATTGTCACCGGTTTA TCGGCGATCGTCGTTGGTGCGATTCTCGCGTTTGCATGGCCACCTGTCGGACAACTTCTTGATGCATTCTCTCATTGGGC AGCGTACCAAAACCCTGTTCTCGCGTGGGCGGTTTACGGCGTGGGCGAACGTTCTTTACTCCCGGTTGGTTTGCACCACA TCTGGAATGCGCCGTTCTTCTTTGAAGTCGGCAGCTATGTAGACCCAGAAACCGGCAAAGAGTTTACCGGTGAGCTCACT CGCTTCTTCGCGGGCGATAAAACCGCAGGTTATCTGTCTGGTGGCTTTATGTATTCCATGTGGGCACTACCAGCAGCGGC ACTGGCGATTTACCACTGCGCGTCTCCAGAGCGCAAGAAAATCGTCGGCGGTTTGATGATGTCTGCGGCGTTGACCTCTT GGTTAACTGGTATCACTGAGCCAATCGAATTTACCTTCTTATTCGTCGCGCCAGTGCTGTACGTAATCCATATCTTCCTA ACTGGTATTGCATTTGCGATCACCGCATTTTTGGAAATCAAACACAGTACTGACTTTGCGCACGGCGCGATCCAGTTCTT CCTTTACTACCCAATGTCAAGCAACGCGTGGATGTTCATCATCATCGGTCCAATCTGGGCGACGCTGTACTATGGCTTGT TCCGCTTCCTAATTGTGAAGTTGGATCTGAAAACGCCGGGCCGTGAAACCGACATTGCAGAAGTGAAGATTGCCGGACAG CCTGATGAAATCGCAGTGGATGTGGTGGCAGCTCTGGGCGGTAAAGCCAACATCAAATCAGTCGATGCGTGTATCACCCG TCTGCGCGTCTCGGTGAAAGACATTGCCAACGTTGATGTTGCTAAGCTAAAAGCACTTGGCGCGCGAGATGTGTTAGTGA TTGGCGACAGTTTACAAGCGATTTTCGGCACGCAGTCTGACTCAATTAAGTCAGAAGTGCACAGCGTACTCGCTGCCTCC TGA Protein sequence : MFASIFGQLQKIGRSLMLPVAVLPVAGLMLGIGNAGFGFIPDAVNKVMLAAGEGVFGNMQLMFAVGVALGLSKGNDGAAA LAGLVGLIIMNASLGIVTGLRGLETDATIMGVETLQTGVFGGIFIGAVAAIMYNRFYNIKLPEYLGFFAGKRFVPIVTGL SAIVVGAILAFAWPPVGQLLDAFSHWAAYQNPVLAWAVYGVGERSLLPVGLHHIWNAPFFFEVGSYVDPETGKEFTGELT RFFAGDKTAGYLSGGFMYSMWALPAAALAIYHCASPERKKIVGGLMMSAALTSWLTGITEPIEFTFLFVAPVLYVIHIFL TGIAFAITAFLEIKHSTDFAHGAIQFFLYYPMSSNAWMFIIIGPIWATLYYGLFRFLIVKLDLKTPGRETDIAEVKIAGQ PDEIAVDVVAALGGKANIKSVDACITRLRVSVKDIANVDVAKLKALGARDVLVIGDSLQAIFGTQSDSIKSEVHSVLAAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 2e-85 | 43 |
