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Name : fliP (VPA1542) Accession : NP_801052.1 Strain : Genome accession: NC_004605 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1643851 - 1644609 bp Length : 759 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAACAATCTGAGCGCTTGGCATCGTTGGTTACCTTTGTTGGTATTGGTGTCACTTTTGTTTGCATTCCCAACAATGGC AGCAGACAACGGCTTAACAATTCTGTCCGTCACGGACGGCGACGCACAACAAGAGTACAGCGTTAAACTACAAATTCTTT TGTTGATGACGGCGCTCAGTTTCCTTCCTGCTTTCATTTTGATGGCGACGAGCTTTACACGCATTATTGTGGTGCTGGCT ATCTTGCGCCAAGCGCTTGGTTTGCAGCAGAGCCCGCCAAACCGCGTGTTAGTGGGTATTGCATTAACGCTTACTCTGCT CATCATGCGCCCTGTTTGGACGGATATCTACGAGAATGCGTTCCAACCATACGACAATGGTGAAATTACGCTGGTTCAAG CATTTTCCGTTGCGGAAAAGCCCGTTCGCAACTTCATGTTGGCGCAAACCCATCAGAGCTCTCTTGAGCAAATGTTGCGA ATTGCCAATGAGCCGCTCGATCAAAAAGTAGAAGACATCTCGTTTGCCGTTGTTCTTCCTGCGTTTGTGATCAGTGAGCT TAAAACTGCGTTCCAAATCGGCTTTATGCTGTTCATTCCGTTTTTGATCATCGACTTGGTGGTCGCTAGCGTCTTGATGG CCATGGGTATGATGATGCTTTCACCACTTATCGTCTCTTTGCCATTCAAGTTGGTGGTGTTCGTTCTGGTCGATGGCTGG GCGATGACAGTCGGCACTCTTTCAGCCAGTTTCGGTTAA Protein sequence : MNNLSAWHRWLPLLVLVSLLFAFPTMAADNGLTILSVTDGDAQQEYSVKLQILLLMTALSFLPAFILMATSFTRIIVVLA ILRQALGLQQSPPNRVLVGIALTLTLLIMRPVWTDIYENAFQPYDNGEITLVQAFSVAEKPVRNFMLAQTHQSSLEQMLR IANEPLDQKVEDISFAVVLPAFVISELKTAFQIGFMLFIPFLIIDLVVASVLMAMGMMMLSPLIVSLPFKLVVFVLVDGW AMTVGTLSASFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 3e-31 | 42 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-31 | 42 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 3e-31 | 42 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-31 | 42 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 3e-31 | 42 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-31 | 42 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-31 | 42 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-31 | 42 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-31 | 42 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 3e-31 | 42 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-30 | 42 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 9e-29 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 3e-28 | 41 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 2e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | NP_801052.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 9e-63 | 63 |
| fliP | NP_801052.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 7e-56 | 55 |
| fliP | NP_801052.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 6e-50 | 54 |
| fliP | NP_801052.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 3e-54 | 53 |
| fliP | NP_801052.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 1e-30 | 42 |
| fliP | NP_801052.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 2e-31 | 42 |
| fliP | NP_801052.1 | flagellar biosynthesis protein FliP | VFG0715 | Protein | 1e-30 | 41 |
