Gene Information

Name : VPA1516 (VPA1516)
Accession : NP_801026.1
Strain :
Genome accession: NC_004605
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1622611 - 1623372 bp
Length : 762 bp
Strand : -
Note : similar to DBJ:BAB06876.1 (AP001517) percent identity 40 in 229 aa

DNA sequence : 
ATGAGGCGTCTCCCAGACAAGGAAAGGATCATGGAACGGCATACAACCAACGTGGTGGCGAACATATTGTTGATTGAAGA
CGATGATGACTTGGCCGAACTGGTTCAAATGCATCTCAAGTTTCAGGGGCATCACGTCAGTCGAGAATCCAGCGTTGCAG
CGGGTAGAAATACTTATCAGCAGCAGTCGTTTGATTTGGTGATCCTCGACAGAGGTTTACCCGATGGTGATGGTTTAGAT
ATTTGCCATCACTTGCGTCAACGGCAAGATTGGACGCCGGTTTTGGTGTTGACTGCAAGAGACGGTGAGATGGATAAAGT
GGATGGATTGGAAGCTGACGTCGATGATTACATTACAAAGCCGTTTAGTGTTTTAGAGTTTCAAGCTCGGGTGAGAAATG
TACTTCGGCGCGTTAATCAAGTCGCTGAAAAGCCGACTCCAGAAAAAGCAGAAGATGGGGCACTTAACTTTGGTGATTTG
AAGATCATTCCCCAATTGCATCAGGTTTCGCTCAACGATAAAGACGTCGCGCTGACGGCAACCGAATTTACCTTGCTACA
GTTTCTCGCCACTCGTCCCGGTCGAGTCTACAGTAAGGACGAGCTGTTGGATCATGTCTGGAACACCAATCATGCTGGGT
ATCATCACACGGTTTGTAGCACCATTAATCGCTTGCGCAGCAAGCTGTCGTTGTCGGACTCAGAGCATCATTTTATTCAA
ACGGTTTGGGGTGTTGGGTACAAATTTCAGCCGCGCCCATAA

Protein sequence : 
MRRLPDKERIMERHTTNVVANILLIEDDDDLAELVQMHLKFQGHHVSRESSVAAGRNTYQQQSFDLVILDRGLPDGDGLD
ICHHLRQRQDWTPVLVLTARDGEMDKVDGLEADVDDYITKPFSVLEFQARVRNVLRRVNQVAEKPTPEKAEDGALNFGDL
KIIPQLHQVSLNDKDVALTATEFTLLQFLATRPGRVYSKDELLDHVWNTNHAGYHHTVCSTINRLRSKLSLSDSEHHFIQ
TVWGVGYKFQPRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPA1516 NP_801026.1 two-component response regulator HE999704.1.gene2815. Protein 6e-26 41
VPA1516 NP_801026.1 two-component response regulator NC_002952.2859905.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_007622.3794472.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_003923.1003749.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_002745.1124361.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_009782.5559369.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_002951.3237708.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_007793.3914279.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_002758.1121668.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_009641.5332272.p0 Protein 1e-20 41
VPA1516 NP_801026.1 two-component response regulator NC_013450.8614421.p0 Protein 1e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPA1516 NP_801026.1 two-component response regulator VFG1702 Protein 4e-27 41