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Name : VPA1495 (VPA1495) Accession : NP_801005.1 Strain : Genome accession: NC_004605 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1596172 - 1597803 bp Length : 1632 bp Strand : + Note : similar to GB:AAF96873.1 (AE004424) percent identity 81 in 537 aa DNA sequence : ATGTCTTCTCAAACCATTCTTTCGGTGAACAACTTGTCTGTCAGCTTTACGACAAACGATGGGATCGTCGATGCAGTAAA GAATGTTAGCTTCGAGCTACAAGCGGGTGAAACGCTGTCTATCGTCGGCGAATCTGGTTCCGGCAAATCAGTTTCCACCA ACGCTTTAATGACGCTGCTACCAGACAACGCCATTGTCCATCCAGACTCGTCAATCATGTTTGAAGGCGAATCCATTCTG GACAAAACTGAGCGACAAATGCAGCGCATTCGCGGCGATCGCATCGGAATGATATTCCAAGAGCCGATGACTTCACTGAA TCCGTACATGCGGGTCGGTATTCAAGTGGCGGAAGCCATGATGTGTCATCGCTCAGTCAATCAGCGCAAAGCCAAAGAAC GTGTGCTTGAACTGTTTGATTTGGTTCATTTGCCGAACCCGCAACAAGCCTATGATAAGTATCCACATGAGTTTTCTGGT GGTCAGTTACAACGCATCATGATTGCCATGGCGCTAATTAACGAACCAGACATCTTAATTGCCGATGAACCGACAACCGC GCTTGACGTTACTGTTCAGGCGGAAGTGCTACTGCTGATTAAAGAGATTCAAGCAAAAATGGGGATGGCTATTTTATTTA TCACCCATGACCTAGGCGTGGTGAAACACTTTGCCGATCGTGTGTTGGTGATGTGCAAAGGTGAGGTCGTTGAAGAAGGC ATCACTGAGCACTTGTTTTCTGAACCTCAGCATGAATACACCAAAATGCTGATTAACTCGATTCCGAAAGGAAGCAAAAC CCCCGTTGATGAGAAAGCGTCGGAATTGCTCAACGCTGAAGACATTCGTGTGAAGTTTTTGGTGAAGCCTCACTTTATCG CAAGCAAAAACGAGTACTTCGAAGCGGTAAAAGGCATCTCGTTACAACTAAAACAGGGCGAAACACTAGGCATTGTTGGT GAATCCGGTTCGGGTAAATCCACGTTAGGGCGTGCGTTGATCGGTTTGCTACCGTCTACCGGAAAAATTGAGTTTAAAGG TCAAAACATGGCCTCACTCAGTGATAAAGAGCGGTTCGATCTGAAAAAAGACGTACAAATGGTGTTCCAAGATCCATACG GTTCGCTTTCACCACGTATGACCATCGGGGAAATCATCACTGAAGGATTAACCGTCCACCGACCATATTTAAACAAGAAA GAACGCATGCAAAAAGCACGTGATGTTCTGCGCGAAGTACGTTTGGATCCCGCATCTATAAACCGCTATCCGCACGAATT TTCCGGTGGGCAACGTCAACGTATTGCGATTGCACGAGCCTTGATTTTGGAACCGTCGTTTATCTTGCTTGATGAGCCGA CCTCAGCCTTAGATCGCTCAGTACAACTCACTGTCATCGATCTTCTCAAAGACTTGCAGAAAAAACACAATATCGGTTAT TTGTTCATAAGCCATGATTTATCAGTGGTTAAGGCGCTTTCTGATCGCGTATTAGTGATGCAAAAAGGAGAAGTGATGGA GCAAGGAAGCGCACAAGAGATTTTCCATCACCCAAAAAGTGAGTACACTAGAAAACTGATTGATGCCTCATTTGATCTTG AAAACAATGAAAATCAAAATGATGCTGCTTAG Protein sequence : MSSQTILSVNNLSVSFTTNDGIVDAVKNVSFELQAGETLSIVGESGSGKSVSTNALMTLLPDNAIVHPDSSIMFEGESIL DKTERQMQRIRGDRIGMIFQEPMTSLNPYMRVGIQVAEAMMCHRSVNQRKAKERVLELFDLVHLPNPQQAYDKYPHEFSG GQLQRIMIAMALINEPDILIADEPTTALDVTVQAEVLLLIKEIQAKMGMAILFITHDLGVVKHFADRVLVMCKGEVVEEG ITEHLFSEPQHEYTKMLINSIPKGSKTPVDEKASELLNAEDIRVKFLVKPHFIASKNEYFEAVKGISLQLKQGETLGIVG ESGSGKSTLGRALIGLLPSTGKIEFKGQNMASLSDKERFDLKKDVQMVFQDPYGSLSPRMTIGEIITEGLTVHRPYLNKK ERMQKARDVLREVRLDPASINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIDLLKDLQKKHNIGY LFISHDLSVVKALSDRVLVMQKGEVMEQGSAQEIFHHPKSEYTRKLIDASFDLENNENQNDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-84 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-84 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-84 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-84 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-105 | 42 |
