Gene Information

Name : VPA1393 (VPA1393)
Accession : NP_800903.1
Strain :
Genome accession: NC_004605
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 1462860 - 1464125 bp
Length : 1266 bp
Strand : +
Note : similar to GB:AAD51802.1 (AF170560) percent identity 24 in 376 aa

DNA sequence :
ATGGCTGCGTATTTAAGTAAGCAACTCTTAGATTCAAATATGATTGATTTGATTATTTGCTTCTCTCCGTCAGTTAATGT
TGCTAATGGGTTTACACGCACTTTTTCTCGGGTATTACAATGCTCATTCAATGGCTCTTTAGGAGCATTAGGAACATCGC
TGACCTATCAAGCTATCCAATATCTCGATGAGCAATTTTGGGAAACAATTTCAAAGCACCGAGTCTTGGCTATATTCGAT
GAAATCCATCATTGTTCAGGTGAAACTCTTTCTGACGCGAATGCTTGGGGCGAGCAGATTATTTTAAAAGTGCAGAAAGC
ATCCAAGTATACTTTGGCACTGACGGGAACTCCTTGGCGCTCAGATAGCTTACCAATATCACTGAGCTCTTATAGCAATC
CGGAAGGAAAAATCATCTGCGATTATCAGTACACTTTAAAGCAGGCTATCACCGACAGAGTATGTCGAAAGCCGAAACTC
GTGTTAGTTGATAACGAGCAGTTGCAATATGTCAGCCCAGAAGAAAGTAAATATTATTCATCGATTCAAGCATTATTTAA
AGAACAAAAAATAAGTTATTCTAGTATCTTACAGGATACAGATGCTTTAGTTCATATTCTCAAACTATCTGCCAGTAAGC
TACTTTCCATTAGAGCATCCAACCAAGATGCGGGCGGACTTATCGTCGCTTCGTCTGTTGCACATGCGAGACAAATTCAA
ACAATCCTGAATGAACAGCTAAAGCAACCCAGCGTGATGGTTTCTTATCATGACCCAGATGCTCAAAAGATAATTGAACA
ATTCAAAAATGGTCACTCCCCTTGGATTATCAGCATTGGAATGATCAGTGAGGGAACTGACATTCCAAGACTTCAAGTCT
GTTGCCATTTGAGTAATGTTCGCACGGAGTTGTATTTCCGTCAGGTGTTAGGGCGCATTCTCAGAATCACAGATAGCAAC
AACCAAGAAGCTTGGCTGTACACGCTTGCTGAAGAAAATCTTGTTAAATTTGCTGAAGAAATCGAGCAAGATATTCCTGA
TTCTTGTCTTTATATAAAACAGCCTGAGGACAAAGAGGAAGAAGACGCACATTCACTTGAAACAAGCTCATCACATACTG
TTCGAACCTTTTCGAAACTAGGGAATTTCAAATGGAATAACAGTGATACAAGTGCACAAGTTGGTAACGAAAATTCTGTT
CCTTATGGGTCGTTCACTCTGGGGCGTTTTAGAGAACGGGTGATTGAGGCGTTTGTTGGGATTTAG

Protein sequence :
MAAYLSKQLLDSNMIDLIICFSPSVNVANGFTRTFSRVLQCSFNGSLGALGTSLTYQAIQYLDEQFWETISKHRVLAIFD
EIHHCSGETLSDANAWGEQIILKVQKASKYTLALTGTPWRSDSLPISLSSYSNPEGKIICDYQYTLKQAITDRVCRKPKL
VLVDNEQLQYVSPEESKYYSSIQALFKEQKISYSSILQDTDALVHILKLSASKLLSIRASNQDAGGLIVASSVAHARQIQ
TILNEQLKQPSVMVSYHDPDAQKIIEQFKNGHSPWIISIGMISEGTDIPRLQVCCHLSNVRTELYFRQVLGRILRITDSN
NQEAWLYTLAEENLVKFAEEIEQDIPDSCLYIKQPEDKEEEDAHSLETSSSHTVRTFSKLGNFKWNNSDTSAQVGNENSV
PYGSFTLGRFRERVIEAFVGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 2e-78 48