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Name : VPA1338 (VPA1338) Accession : NP_800848.1 Strain : Genome accession: NC_004605 Putative virulence/resistance : Virulence Product : ATPase YscN Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 1410089 - 1411351 bp Length : 1263 bp Strand : - Note : similar to EMB:CAD22886.1 (AJ430232) percent identity 38 in 402 aa DNA sequence : ATGCTCAAGTACTTTTTTAAAGTGAAGGAGTCGTATCAAGATACAGTGATTTGTCATGTCAACATCGATACTTTTGTTGG GCAAGAGTGCTTTGTGCATACTATCACGGGAGAGAGAATCCGCGGTGAAATCGTTAAGGTGACAGGCTCAAAGTTGGAGA TTAAGTTACTTCAACCGGGATCAGTGCAACGGGGGGGCAAAGTAGAGATCACGCCACGACGTTTTTGTTTTCCCCTAAAT GAAAGCGCGCTAGTTGGTAAAGTAATTAACTGCTATGGAGAAACCTTATACGGTGATAGTTACTTAGGGCAACCGGGCGA ATTTATCGATTTGCCCATCGCCGTTGAGCCTATTCCCTTGCAGATGCGAGCTCCTATTGAAACGGTATTTCCAACAAAGT TAAAGATCATCGATGGGTTGTTTACTATTGGAGAAGGACAACGTTTAGGATTATTCGCACCGGCAGGGGCAGGTAAAACC ACGACAGTATCCATTATGGCCAACAATATGGATGCTGATGTGGTCATCTTCGCCATGATTGGTGAACGCGCTCGTGAGGT TGTCGAATTTCTTGAAGGGGAAATCGGTCCAGAGGTAATCAGAAAATCAATCACTATAGTTTCAACATCAGAAGCTAACC CGTTAGAAAAAGTTCGATCTGGTTTGGTTGCTGTTTCAATAGCTCGTTACTATATGGAACAGGGTAAGAAAGTAGTACTT TATTTTGACTCTTTAACACGATTTGCTCGTGCTCAGGCCATGTTGGATGGGACTCCAATTAAAGGGGGGATTCCGATAGG AGTATCGTTGGCTCTTTCTCGTTTGGTGGAAAGCTGTGGTAATTCCATACAAGGTTCGGTTACCGGTATTTTTACCGTTT TGATCGAAAAGGAAATAGATGATGATCCTATTGCTCATGAGGTAAAGTCATTAATCGATGGCCATTTGGTGTATTCAACC ACTATAGCCGCAACAGGACGTTACCCTGCGATTGATGTACTCAAGAGTAAGAGTCGTCTACAAAATAAAGTACAAGAAAA GTACTATGTGCGACTTTCTGAGAAAATTAAAGACATGGTTTATCGCTATTTCAATGTGGAGTTACTCATTCGAGTCGGTG AGTACGAGAAAGGTAATGATCTAGAAACTGATGAAGCTATAGAACGCTACCCTAAAATTATCGAATTCTTAAAACAAGGC TTTGAAGGTGTTGAGTATGAAGAAACCCTCCAAGAAATGGAAAGAATTTGGTCAAATTATTGA Protein sequence : MLKYFFKVKESYQDTVICHVNIDTFVGQECFVHTITGERIRGEIVKVTGSKLEIKLLQPGSVQRGGKVEITPRRFCFPLN ESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAPIETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKT TTVSIMANNMDADVVIFAMIGERAREVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVL YFDSLTRFARAQAMLDGTPIKGGIPIGVSLALSRLVESCGNSIQGSVTGIFTVLIEKEIDDDPIAHEVKSLIDGHLVYST TIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDMVYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQG FEGVEYEETLQEMERIWSNY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-54 | 41 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 5e-56 | 41 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 2e-54 | 41 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 1e-56 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPA1338 | NP_800848.1 | ATPase YscN | VFG0390 | Protein | 2e-58 | 41 |
