Gene Information

Name : VP0642 (VP0642)
Accession : NP_797021.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 672008 - 672505 bp
Length : 498 bp
Strand : +
Note : catalyzes the endonucleolytic cleavage to 5'-phosphomonomer

DNA sequence :
ATGAATACACAACTTCAAACGACACATCTATTACACAACGCTCAGCACCCACTAAGTATCTATTGCGATGGTTCAGCACC
AGACAATCAGCACGGGTGTCTTCAAGGGGGTGTTGGTATCGCGGTTTACGACGCTCTTGGTCAATGCGTCTATGAGTACT
CATCCTCGGTTCGCAGGACTGGCGGTGTCACCAGCCAAAGGGCTGAGCTTCTGGCTCTCATCATTGCCTTACTTGTAGCA
GGTGAGGGGGACAATGTCTTTAGTGACAGTCAGTACTGTGTGCGGGGCTTCAATGAATGGCTTGATAGCTGGAAGCGTAA
CGCTTGGCGCAACTCAAGCAAGAAGCCTGTCGCTAATCAGGACTTATGGATGCTGATAGATGAGCTTAAAGCTATTCGTC
CACGTGTTAGCGTCGAGCACCTAGCTGGTCACTCTGGCATCAAAGGTAATGAGCATTCAGACCGCTTAGCAAGGCAAGCA
GCCGAAGATAAAATGTAA

Protein sequence :
MNTQLQTTHLLHNAQHPLSIYCDGSAPDNQHGCLQGGVGIAVYDALGQCVYEYSSSVRRTGGVTSQRAELLALIIALLVA
GEGDNVFSDSQYCVRGFNEWLDSWKRNAWRNSSKKPVANQDLWMLIDELKAIRPRVSVEHLAGHSGIKGNEHSDRLARQA
AEDKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0498 NP_230152.1 ribonuclease H Not tested VSP-2 Protein 5e-22 50