|
Name : VP0047 (VP0047) Accession : NP_796426.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 52216 - 53931 bp Length : 1716 bp Strand : + Note : similar to GB:AAF93346.1 (AE004107) percent identity 90 in 571 aa DNA sequence : ATGTCACTATTAGAGGTGAAAAACCTTCGTATTGAGTATCCATCCCGACACGGCGTTCACGCGGCCGTGAAATCACTTTC GTTTAATATTGAACGAGGTGAAATCGTGGGTGTTGTTGGCGAATCCGGTGCGGGTAAGTCCACCGTTGGTAACGCCGTTA TCGATTTGCTGAGCCCTCCGGGACGCGTTGCCAGTGGCGATGTCTTTTTGGATGGTGAAAAAATCTCTGGCTTAACACCA GAAGCGATGCGTAAGGTGCGTGGCTCGAAGATTGGTTTTATCTTCCAAGACCCTATGACCTCTCTTAACCCTTTGTTTAC GGTTGAGCAGCAGCTAAAAGAAACCATTCATGCCAACATGAAAGTGTCTGACGACGAGGCGTATCAACGCGCGTTGTCTC TGATGCAGCAAGTCGGCATCCCTCAGCCTGAAAACCGTCTTAAACAGTATCCTCACCAGTTTTCTGGTGGTATGCGTCAG CGTGTGGTTATCGCGATCGCTTTGGCTGGTGAGCCAGATCTGATCATCGCCGATGAGCCAACCACGGCACTGGACGTATC AATCCAAGACCAAATCCTGAATCTTATCCGAGAGTTGTGTATCCAGAACAATGTTGGTTGTATGTTGGTTACGCACGACA TGGGTGTGGTTTCAAACGTTACAGACCGCGTAGCGGTAATGTACCGTGGCGATCTTGTTGAGTTTGGGCCAACGGCAAAA GTGTTGGGTAACCCAGATCATCCATACACGCGCAGCTTGATTTCGGCGGTTCCTCGCTCAGACAGAAAGCTCGACCGTTT CCCTCTGGTGAGTTACATCGAAGAAGCGACAGAAATGAAGTCGCTAGACATTAAGAATCACTGGCTGGGTCAAAGCCAAG ATCAGCGTGAGTACACTGGCCCGTTGTTGGATGTGAAAAACGTCAACCTAAGGTTTGTGACTAAGGACTCTTTGTTTGAA AGCCGCCGTGAGTACGTGCAGGCATCGAACAATGTGAGTTTTGAAGTGCACGAAGGTGAGACGTTTGGTCTGGTGGGTGA GTCAGGTTCGGGTAAGTCGACCATCGCGCGCGTGATTGCTGGCTTGTATGAGCCAAACTCTGGCCAAGTGAAATTTGAAG GTATCGATCTCACGGCGATGAAGTCGGAAAAAGAGCGTCGTCCGATGCGACGTCAAATGCAGATGGTGTTCCAAAACCCA TACACGTCTATGAACCCTCGTATGAAGGTGGCAGACATTATTGCCGAGCCAATTCGTTTCCATAGACTCACCAAAAATGA AGCAGAAACACGTCAAATAGTGAATGATTTGCTTGATCATGTTGGTTTGGGTCGCATGGCTGGCGTGAAATATCCTCATG AATTCTCTGGTGGTCAGCGTCAGCGTATTTCGATTGCGCGCGCTCTGGCAACTCGTCCTCGACTTTTGATTTGTGATGAA CCGACATCAGCGTTGGATGTGTCGGTACAGGCACAAATTCTGAACTTGCTAAAAGATCTGCAAAGTGAACTGAACCTAAC GATGTTGTTTATCAGTCACGATTTACCGGTGATTCGTCAGATGTGTGACCGAGTAGGTGTAATGCAGATGGGCACGTTAT TGGAAGTCGCGCCTACCGAGCAGCTCTTTACTGCTCCACAGCACGAATACAGCAAAAAATTGATCTCTCTGATGCCTGAA TTTACGGGCTTGCGAGAAGAAATCAAAACGGCATAA Protein sequence : MSLLEVKNLRIEYPSRHGVHAAVKSLSFNIERGEIVGVVGESGAGKSTVGNAVIDLLSPPGRVASGDVFLDGEKISGLTP EAMRKVRGSKIGFIFQDPMTSLNPLFTVEQQLKETIHANMKVSDDEAYQRALSLMQQVGIPQPENRLKQYPHQFSGGMRQ RVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELCIQNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK VLGNPDHPYTRSLISAVPRSDRKLDRFPLVSYIEEATEMKSLDIKNHWLGQSQDQREYTGPLLDVKNVNLRFVTKDSLFE SRREYVQASNNVSFEVHEGETFGLVGESGSGKSTIARVIAGLYEPNSGQVKFEGIDLTAMKSEKERRPMRRQMQMVFQNP YTSMNPRMKVADIIAEPIRFHRLTKNEAETRQIVNDLLDHVGLGRMAGVKYPHEFSGGQRQRISIARALATRPRLLICDE PTSALDVSVQAQILNLLKDLQSELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTAPQHEYSKKLISLMPE FTGLREEIKTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-104 | 41 |
