Gene Information

Name : VP0372 (VP0372)
Accession : NP_796751.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Unknown
Product : hemolysin
Function : -
COG functional category : R : General function prediction only
COG ID : COG3176
EC number : -
Position : 372883 - 374631 bp
Length : 1749 bp
Strand : -
Note : similar to GB:AAF93662.1 (AE004135) percent identity 68 in 579 aa

DNA sequence :
ATGGATAGTTCGACCCCTTTTCGTCTCCCTCGTAAAACGCCGTTTGGCATTGGTGAAAACGTTGCAGAATGGGCTACGGG
TTTAAGTCAGCTCGATAAATTCTACGCCCAACGCCCCGTGAATGCGGATACCAAAACTTTTTTGCGATTCACACTGGATA
TTTTGGGTATCGACTATCGCATTGCCCATGGTTCGCTCGGCTCAGTGCCAAAGCAAGGCGCAACCGTCATTGTGGCGAAT
CACCCTCTCGGCTGTGTTGAAGGAGTGATTCTCGCCGAACTACTGTTGATGGTACGAGACGATATCCAAATTTTAGCGAA
TCAGTACCTAAAAACCGTGCCAGAGCTCGACCAACTTTTTATTGGTGTCGACGTATTCGAGGGCAAAGATGCGGTCAAGT
CGAACATGAAGGCACTTAGAGCAGCCAACAAACACCTTGCGAATGGCGGCTTGTTATTAGTTTTCCCTGCAGGTGAAGTG
TCGCAGTTGGTGGATGCCAAACAACAGCGTTTAGAAGACAAAGAATGGAGCCGCAGTGTCAGCGCGTTAATTCGTAAGAA
CAAAGCCGTCACTGTTCCTGTCTTCATTCGTGGGCAGAACTCAAAACGCTTCTACATGGCAGGTAAAATCCACCCTCTTT
TACGCACCTTGATGTTAGGAAGAGAGCTGCTCAACAAGAGCGCAAAAACCATTGAGTTGTCCTTTGGGCAAGCAATCAAG
TTTAAAGAACTCAATAACCTCAACGATGATCAGATCGTCAATTATCTGAGGCTTAACACCTACCTGCTTAACCGCGATGT
AAGTGCCACTCAGCAAACGGTCTCAGACAATGATCTCTTACCTATTGCAGCAGGGTTACCCATAGGCCAATTGCTTGAAG
AGCTGCACAGCTTACCGGCAGAAACCCAATTGCTTCAAAATGGCGAGTTCGACGTGTACTGCGCCAGCGCACAGCAGATC
CCATCTCTCCTGCATGAAATTGGCCGCTTGCGAGAACATAATTTCCGTCAAGTTGGCGAAGGGACCGGACAAGCAATAGA
CATCGATCATTTCGATCATGATTACCTGCACCTGTTTGTGTGGGATCGTGAGAACCAATGCATGGTAGGAGCTTACCGTC
TTGGATTAGTTGATCAATTATTGGCGAAATATGGCGTAGAAGGATTGTATTCGCGCACCTTGTTCAACTATGACCAACGC
TTTCTCGATCAAATGGGCAAGTCGATTGAAATGGGTCGTTCTGTGATTGCCGAGCAATATCAAAAAAGCATGAGTGCCCT
ACTCTTACTCTGGAAAGGTATAGCGACTTTTGTCCATCAACATCCCGAATACACGCACTTGTTTGGCCCAGTGAGCATCA
GCAACGATTACAGCCATACCGCGCGTCAATTATTGGCACAATCGATGACCCTACACCACTACGACAACGACTGCGCCGAA
TACGTCACTCCGTCAAACCCACTGCCAGAAACCAACTTAAACTGGAATACCAGCATGCTAACCGCATTGGGAGATTTACA
GTTGCTATCTCGCGTGATCGCTCGAATTGACGAAGGCAAAGGCGTTCCGGTATTACTGCGCCAATATTTGAGTTTGAATG
GTAAGTTGGTGTGTTTTAACGTCGATCCGGCGTTTAACAACGCACTGGATGGATTGATTATGGTGGATTTACGCGATGTA
CCTGAGAAAACGCTGGCACGTTATATGGGCAGTGAAAACGCACGCGAGTATTTAGCTATGAACAATTAA

Protein sequence :
MDSSTPFRLPRKTPFGIGENVAEWATGLSQLDKFYAQRPVNADTKTFLRFTLDILGIDYRIAHGSLGSVPKQGATVIVAN
HPLGCVEGVILAELLLMVRDDIQILANQYLKTVPELDQLFIGVDVFEGKDAVKSNMKALRAANKHLANGGLLLVFPAGEV
SQLVDAKQQRLEDKEWSRSVSALIRKNKAVTVPVFIRGQNSKRFYMAGKIHPLLRTLMLGRELLNKSAKTIELSFGQAIK
FKELNNLNDDQIVNYLRLNTYLLNRDVSATQQTVSDNDLLPIAAGLPIGQLLEELHSLPAETQLLQNGEFDVYCASAQQI
PSLLHEIGRLREHNFRQVGEGTGQAIDIDHFDHDYLHLFVWDRENQCMVGAYRLGLVDQLLAKYGVEGLYSRTLFNYDQR
FLDQMGKSIEMGRSVIAEQYQKSMSALLLLWKGIATFVHQHPEYTHLFGPVSISNDYSHTARQLLAQSMTLHHYDNDCAE
YVTPSNPLPETNLNWNTSMLTALGDLQLLSRVIARIDEGKGVPVLLRQYLSLNGKLVCFNVDPAFNNALDGLIMVDLRDV
PEKTLARYMGSENAREYLAMNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0489 NP_230143.1 hemolysin Not tested VSP-2 Protein 0.0 69