|
Name : cadB (VP2891) Accession : NP_799270.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : lysine/cadaverine antiporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0531 EC number : - Position : 3076090 - 3077433 bp Length : 1344 bp Strand : - Note : antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein DNA sequence : ATGTCATCGAATACGAAAAAAATCGGCCTAATTGCCTGTACGGGTGTAGTCGCCGGTAACATGATGGGTAGTGGTATTGC ACTGTTACCTTCTAGCCTAGCTTCAGTAGGCTCTGTTTCAATTTTCAGCTGGCTGATCTGTTTGATCGGTGCACTGAGCC TTGCGTTTGTTTACGCTCGTCTGGCAACCAAAAACCCTCAAGAAGGTGGTCCTATCGCTTATGCGGGCGAAGTTTCCCCA GTCTTTGGTTTCCAAACGGGCGTGCTTTATTACCACGCGAACTGGATTGGTAACCTAGCTATTGCTATTACAGGTGTTTC TTACCTTTCAGTATTCTTCCCTGTGCTTAATGACCCAATCCCAGCAGGTATTGCGACGATTGCATCGGTATGGATCTTCA CTTTCGTCAACCTACTTGGTGGTAGCTGGGTAAGCCGTCTATGTACGCTTGGTCTTGTTCTAATCCTAATTCCAGTTGTT GGTACCGCTCTATTTGGTTGGACGCACTTCGACACTGCGCTATACAGCCAAAACTGGAACGTATCTGCGGGTACTGATAG CCATGCGATTGTGACTGCGGTTCTTATCTGTCTATGGTCATTCGTTGGTGTGGAATCAGCAGCAGTATCGACAGGTATGG TAGAAAACCCTAAACGTACTGTACCGCTAGCAACCATGCTGGGTACTGGTATCGCAGGTGTGATTTACATCCTATCAACT CAAATGATCAGCGGCATGTTCCCTGCTTCTGAAGTTGCGGCATCAGGTGCGCCATTTGCATTGGCAACCACTGAGCTATT CGGTAGCTGGACTGCACCATTCGTATCAGCATTCACTGCACTAGCATGTTTTACTTCGCTAGGTTCTTGGATGATGCTGG TGGGCGAAGCTGGTAAACGTGCAGCAAGCGATGGCAACTTCCCTAAAATCTACGGCGAAACTGACAAAAACGGTGTGCCT AAGAAAGGTTTAATCCTTGCGTCAATCAAGATGACAGCATTAATGGTTGTACTGATGTTCTTCAGCTCTAAAACAGCACA CGCATCAGACCTGTTCAACCAGCTAACGACTGATGCAGTTCTACTAACTATGCTGCCTTACTTCTACTCAAGCATTAACT TGATCCGCTTTGAAGGTATGACAACACGCAACGGCTTCGTAATGCTGTTCTCTGGTGTGGCTTGTCTGTTCTGCTTCATT GCCCTTGCTGGTGCAGAAGGCGGTACGCTAACAGCAACCTTCATCGTGTCTCTCGTTATCTTGATGTTCTACAGCAAAAA AGCCGGCTTAGCTCAGTACATGAAGCTACACGCTGACGACATGCCTGCTCAAGCAAGCAACTAA Protein sequence : MSSNTKKIGLIACTGVVAGNMMGSGIALLPSSLASVGSVSIFSWLICLIGALSLAFVYARLATKNPQEGGPIAYAGEVSP VFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNDPIPAGIATIASVWIFTFVNLLGGSWVSRLCTLGLVLILIPVV GTALFGWTHFDTALYSQNWNVSAGTDSHAIVTAVLICLWSFVGVESAAVSTGMVENPKRTVPLATMLGTGIAGVIYILST QMISGMFPASEVAASGAPFALATTELFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRAASDGNFPKIYGETDKNGVP KKGLILASIKMTALMVVLMFFSSKTAHASDLFNQLTTDAVLLTMLPYFYSSINLIRFEGMTTRNGFVMLFSGVACLFCFI ALAGAEGGTLTATFIVSLVILMFYSKKAGLAQYMKLHADDMPAQASN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadB | NP_756989.1 | lysine/cadaverine antiporter | Not tested | PAI II CFT073 | Protein | 4e-133 | 71 |
| cadB | AAL67382.1 | cadaverine/lysine antiporter | Not tested | PAI II CFT073 | Protein | 3e-133 | 71 |
| unnamed | CAD66196.1 | putative lysin/cadaverin transporter | Virulence | PAI III 536 | Protein | 1e-130 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadB | NP_799270.1 | lysine/cadaverine antiporter | VFG1671 | Protein | 8e-131 | 66 |
