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Name : VP2890 (VP2890) Accession : NP_799269.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 3073839 - 3075974 bp Length : 2136 bp Strand : - Note : similar to GB:AAK01664.1 (AF324470) percent identity 92 in 711 aa DNA sequence : ATGAATATTTTCGCTATCTTGAACCACATGGGTGTGTTCTTTAAAGAAGAGCCAGTTCGTCAACTTCACGCTGCTCTTGA GAAAGCGGGCTACGAAGTGGTTTACCCAGTAGATGATAAAGACTTGATCAAAATGATTGAGATGAACCCACGCATTTGCG GTGTGCTGTTCGACTGGGATAAATACTCACTAGAGCTATGTGAACGTATTAGCCAGATCAACGAAAAACTGCCTGTTCAC GCATTTGCTAACGAACAGTCTACTCTCGATATTTCACTAACAGACCTACGTCTAAACGTGAGCTTCTTCGAGTACGCTTT AGGTATGGCTGACGACATCGCTATCAAAATCAACCAAGCGACTGAGGCATACAAAGATGCCATCATGCCTCCATTCACTA AAGCGCTATTCAAATACGTAGAAGAAGGTAAATACACCTTCTGTACTCCAGGTCACATGGGCGGTACTGCATTCCAGAAA AGCCCTGCTGGTAGCATCTTCTATGATTTTTACGGTCCAAACACATTCAAAGCGGACGTATCAATCTCAATGCCTGAGTT AGGTTCTCTACTAGACCACTCAGGTCCTCATAAAGATGCAGAAGAATACATCGCACGTACCTTCAATGCAGACAGTTCTT ACATCGTAACTAACGGTACGTCTACATCGAACAAAATCGTGGGCATGTACTCAGCACCTGCGGGCAGCACAGTACTGATT GACCGTAACTGTCACAAATCTCTGACTCACCTAATGATGATGAGCGACGTGACACCAATCTACTTCCGCCCAACTCGTAA CGCATACGGCATCCTTGGTGGTATTCCACAAAGCGAATTCAGCCGTGATGTCATTGCAGAGAAAGTGGCGAAAACACCAG GTGCAACAGCGCCAAGTTACGCAGTAGTGACTAACTCAACTTACGATGGTCTGTTGTACAACACACAATTCATCAAAGAG TCGCTAGACTGTAAACACATCCACTTCGACAGTGCTTGGGTGCCTTACACTAACTTCAACCCAATTTACGAAGGTAAATG TGGTATGAGTGGTGAAGCGATGCCAGGCAAAGTGTTCTACGAGACACAATCAACACACAAACTGTTGGCAGCGTTCTCAC AAGCTTCAATGATTCACGTGAAAGGTGACTTTGATAAAGAGTCTTTCAACGAAGCATTCATGATGCACACTTCAACTTCA CCTCAGTACGGCATTGTTGCTTCTACTGAAACTGCAGCGGCAATGATGCGCGGCAACACTGGTAAGAAGTTGATGCAAGA CTCTATCGATCGCGCAATTCGCTTCCGTAAAGAGATCAAACGCCTAGAAGCAGAAAGTGACAGCTGGTTCTTCGATGTAT GGCAACCAGAAAACATCGATACCACAGAATGTTGGAAACTAGACCCTAGCGATACATGGCACGGCTTCAAGAACATGGAT GACAACCACATGTATCTTGACCCAATCAAAGTAACGCTACTGACTCCAGGGATGAACAAAGAAGGCGAACTAGAAGAATC AGGTATTCCTGCTTCGCTGGTGGCTAAATTCCTAGACGAGCGCGGCATCGTGGTTGAGAAAACAGGCCCATACAACTTGT TGTTCCTATTCTCAATCGGTATCGACAAATCAAAAGCAATGCAATTACTACGCGGTCTGACTGAATTTAAACGTGGCTAC GACTTGAACCTAACCATCAAGAGCTTCCTTCCTTCGCTATATAACGAAGATCCAAGCTTCTATGAAGGCATGCGCGTTCA AGAATTGGCACAAGCAATTCATGACCTAACTAAGAAATACAACCTACCAGAGCTAATGTACAAAGCGTTCGATGTTCTTC CAGAAATGAAAGTAACACCACACGCAGCATGGCAAGAAGAGCTTCGCGGTAACGTAGAAGAAATCAAACTGGAAGAAATG GTTGGTCGCGTAAGTGCGAACATGATCCTTCCTTATCCTCCAGGTGTGCCACTAGTACTTCCTGGTGAAATGGTGACTCA AGAGTCTCGCCCTGTGCTGGACTTCCTAGAGATGCTTTGTGAGATCGGGGCGCATTACCCAGGTTTCGAAACCGATATCC ACGGTCTGTACCAACAAAAAGATGGTAGCTACACCGTAAAAGTATTGAAGAACTAA Protein sequence : MNIFAILNHMGVFFKEEPVRQLHAALEKAGYEVVYPVDDKDLIKMIEMNPRICGVLFDWDKYSLELCERISQINEKLPVH AFANEQSTLDISLTDLRLNVSFFEYALGMADDIAIKINQATEAYKDAIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQK SPAGSIFYDFYGPNTFKADVSISMPELGSLLDHSGPHKDAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLI DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFSRDVIAEKVAKTPGATAPSYAVVTNSTYDGLLYNTQFIKE SLDCKHIHFDSAWVPYTNFNPIYEGKCGMSGEAMPGKVFYETQSTHKLLAAFSQASMIHVKGDFDKESFNEAFMMHTSTS PQYGIVASTETAAAMMRGNTGKKLMQDSIDRAIRFRKEIKRLEAESDSWFFDVWQPENIDTTECWKLDPSDTWHGFKNMD DNHMYLDPIKVTLLTPGMNKEGELEESGIPASLVAKFLDERGIVVEKTGPYNLLFLFSIGIDKSKAMQLLRGLTEFKRGY DLNLTIKSFLPSLYNEDPSFYEGMRVQELAQAIHDLTKKYNLPELMYKAFDVLPEMKVTPHAAWQEELRGNVEEIKLEEM VGRVSANMILPYPPGVPLVLPGEMVTQESRPVLDFLEMLCEIGAHYPGFETDIHGLYQQKDGSYTVKVLKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 76 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP2890 | NP_799269.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 64 |
