|
Name : VP2552 (VP2552) Accession : NP_798931.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2695120 - 2697681 bp Length : 2562 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : GTGAAAGCTGAACAAAAACACACTCCGATGATGCAGCAATATCTCAAGCTAAAAGCTGAGAACCCAGAAATTTTGCTGTT CTACCGCATGGGCGATTTCTACGAACTCTTCTATGATGACGCGAAACGAGCGTCTCAACTGCTTGATATTTCATTAACCA AGCGCGGTTCATCGGCCGGAGAACCTATTCCTATGGCGGGAGTGCCATTCCATGCCGTGGAAGGGTATCTCGCGAAACTA GTTCAGCTTGGTGAGTCAGTCGCAATCTGTGAACAAATTGGGGATCCAGCGACGAGCAAAGGTCCTGTTGAGCGTAAAGT AGTACGCATTGTCACGCCAGGCACCGTAACCGATGAGGCGCTGCTTTCTGAACGTCTCGATAACTTAATCGCTGCGATTT ACCATCACAACGGCAAATTTGGTTATGCGACGTTAGACGTTACTTCTGGCCGTTTTCAATTAACGGAGCCAGAAACCGAA GAAGCCATGATGGCAGAACTACAACGCACCGCACCGCGTGAGTTGTTGTTCCCTGAAGATTTCGAGCCAGTCCACTTGAT GTCGAACCGTAACGGTAACCGTCGTCGCCCTGTATGGGAGTTTGAACTGGATACAGCCAAACAACAGTTGAACCAGCAGT TTGGTACCCGTGATCTTGTCGGTTTTGGTGTTGAGCACGCCTCTCTTGGTTTGTGCGCCGCAGGTTGTTTGATCCAATAC GTAAAAGACACACAACGCACTGCTCTACCACATATCCGCTCACTAACATTTGATCGCCAAGATCACTCTGTAATTTTAGA TGCTGCTACGCGTCGCAATCTAGAAATCACCCAAAATTTAGCTGGCGGCACGGACAATACACTCGCCGCAGTTCTCGACC ATTGCTCAACCCCGATGGGCAGCCGCATGTTAAAGCGTTGGCTGCATCAACCGATGCGTTGTATTGATACGCTAAACAAC CGTCTGGATGCGATTGGTGAAATTAAAGATCAAGGCTTATTTACCGATCTTCAGCCAACTTTAAAACAGATTGGCGATAT TGAACGTATCTTAGCGCGTCTTGCTCTACGTTCTGCTCGTCCACGAGATATGGCTCGCCTACGCCATGCCATGCAGCAAC TTCCTGAACTAGAATCACTCACTGCATCCTTAACTCATCCATACCTAGTGAAGTTGGCTCAATATGCTGCGCCAATAGAT GAAGTATGTGAGCTTCTTGAACGAGCTATCAAAGAAAACCCGCCGGTAGTGATCCGCGATGGTGGTGTGATTGCAGAAGG CTATAACGAAGAATTGGATGAGTGGCGCAAGCTCGCTGATGGTGCAACCGAGTATCTAGAAAAGCTCGAAGCGGATGAAC GCGAGCGTCATGGCATCGATACGCTGAAAGTTGGCTACAACGCCGTACATGGGTTCTTCATTCAGGTAAGCCGTGGCCAA AGCCATTTGGTACCGCCACATTACGTGCGTCGCCAAACTCTGAAAAATGCCGAGCGCTACATTATTCCTGAGCTTAAAGA GCATGAAGACAAAGTTCTGAACTCAAAATCAAAAGCACTCGCACTAGAGAAAAAACTGTGGGAAGAGCTGTTCGATTTGC TGATGCCTCATCTTGAACAAATGCAAAACCTAGCTTCTGCCGTTTCACAGATGGACGTGTTACAAAACCTAGCAGAACGC GCAGACTCATTGGATTATTGCCGCCCAACTCTAGTTAAAGACGCAGGTATTCACATTCAAGCAGGTCGCCACCCGGTAGT AGAGCAAGTCACCTCGGACCCGTTCATTGCTAACCCAATAGAATTAAGCCCAAGCCGTAAAATGCTCATCATCACGGGTC CAAACATGGGGGGTAAATCAACCTACATGCGCCAAACTGCGCTAATTGCGTTGATGGCTCACATCGGCTCTTATGTACCT GCAGAATCAGCACAAATTGGCTCATTGGATCGCATCTTTACTCGTATCGGTGCTTCAGATGACTTGGCATCAGGTCGTTC AACCTTCATGGTAGAGATGACAGAAACAGCCAACATTCTCCACAACGCAACCAAGAACAGCTTGGTGTTAATGGATGAGA TCGGTCGCGGTACCAGTACTTACGATGGTCTTTCATTGGCATGGGCAAGTGCCGAATGGCTTGCAACACAAATTGGCGCG ATGACACTTTTCGCTACGCACTATTTTGAACTAACCGAATTACCGAACTTGCTACCAAACTTAGCGAATGTTCACCTAGA TGCGGTAGAACATGGCGACAGCATTGCTTTCATGCACGCTGTTCAAGAAGGCGCCGCAAGCAAATCATACGGCTTGGCGG TTGCGGGCTTAGCTGGCGTACCTAAAACGGTCATCAAAAATGCTCGTACTAAACTGTCTCAACTAGAGCAACTCGGTCAA GCTAGCGACTCGCCTCGTCCAAGCACTGTGGATGTAGCAAATCAGCTCAGCTTAATCCCTGAACCTAGCGAAATTGAACA AGCGTTATCAAACATCGATCCAGACGACTTAACACCTCGTCAAGCCCTTGAAGAGCTGTATCGTTTGAAGAAAATGCTTT AA Protein sequence : MKAEQKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGSSAGEPIPMAGVPFHAVEGYLAKL VQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERLDNLIAAIYHHNGKFGYATLDVTSGRFQLTEPETE EAMMAELQRTAPRELLFPEDFEPVHLMSNRNGNRRRPVWEFELDTAKQQLNQQFGTRDLVGFGVEHASLGLCAAGCLIQY VKDTQRTALPHIRSLTFDRQDHSVILDAATRRNLEITQNLAGGTDNTLAAVLDHCSTPMGSRMLKRWLHQPMRCIDTLNN RLDAIGEIKDQGLFTDLQPTLKQIGDIERILARLALRSARPRDMARLRHAMQQLPELESLTASLTHPYLVKLAQYAAPID EVCELLERAIKENPPVVIRDGGVIAEGYNEELDEWRKLADGATEYLEKLEADERERHGIDTLKVGYNAVHGFFIQVSRGQ SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKKLWEELFDLLMPHLEQMQNLASAVSQMDVLQNLAER ADSLDYCRPTLVKDAGIHIQAGRHPVVEQVTSDPFIANPIELSPSRKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVP AESAQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDGLSLAWASAEWLATQIGA MTLFATHYFELTELPNLLPNLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNARTKLSQLEQLGQ ASDSPRPSTVDVANQLSLIPEPSEIEQALSNIDPDDLTPRQALEELYRLKKML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP2552 | NP_798931.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 72 |
