Gene Information

Name : VP0236 (VP0236)
Accession : NP_796615.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 249662 - 250828 bp
Length : 1167 bp
Strand : +
Note : similar to GB:AAC46249.1 (U47057) percent identity 87 in 388 aa

DNA sequence : 
ATGAAAATCGCAGTTGCTGGGACTGGCTATGTAGGGCTTTCTAACGCCATGTTGTTAGCCCAGAATCACGAGGTGGTCGC
TTTAGATATCATTTCTGAGAAGGTTGACTTACTTAACCAGCGTAAGTCGCCGATTGTTGATACCGAAATTGAACACTTTT
TGGCGCACAAAGAGCTAAATTTTGTTGCGACTACGGATAAGGAAAAGGCTTATTTATCTGCAGATTATGTTGTGATTGCA
ACGCCTACTGATTATGACCCACAAACTAATTACTTTAATACATCTTCTGTTGAAGCCGTGATTAAAGATGTTATGTCCAT
CAATCCTGATGCAGTAATGGTGATTAAGTCTACTGTTCCTGTTGGCTATACTGCTCGAATTAAGGAAGAGCTGGGATGTA
AAAATGTCATCTTCTCCCCTGAGTTTTTGCGAGAGGGCAAAGCGCTTTACGATAACCTTCACCCATCACGTATCATTGTT
GGTGAGCGCAGTGAACGTGCCGAAGTGTTTGCTGGCTTGCTGGTGGAAGGGGCAGTAAAAGACGATATTCAAGTTCTATT
TACTGATTCGACAGAAGCTGAAGCAGTAAAACTATTTTCAAACACCTACCTTGCTATGCGTGTAGCATACTTTAATGAGC
TGGATTCTTACGCAGAAGCGCATGGCTTGGATGCTCGTCAGATCATTGAAGGCGTTGGCTTAGATCCACGTATCGGTAAT
CATTACAACAATCCATCATTTGGTTACGGTGGTTACTGCTTACCAAAAGATACTAAACAGCTTTTAGCCAATTACCAAGA
TGTACCAAACAACATCATTGGTGCGATTGTTGATGCTAACCGCACTCGTAAAGATTTTGTGGCTGAAGCTATTCTTAAGC
GCGAACCAAAAGTTGTCGGTATTTATCGTTTAATCATGAAGGCGGGATCGGATAACTTCCGTGCTTCTTCTATTCAAGGC
ATCATGAAGCGTATCAAGGCGAAAGGTGTTGAGGTCGTAGTTTACGAACCAGTGCTCAAAGAAGAAGATTTCTTTAACTC
TCGAGTGATTAAAGACCTGAATGAGTTTAAACAAAGTGCGGATGTGATTGTTTCTAACCGCATGGTGGAAGAGTTAGCTG
ACGTTGCGGATAAAGTTTACACGCGTGACTTGTTTGGTAGTGATTAA

Protein sequence : 
MKIAVAGTGYVGLSNAMLLAQNHEVVALDIISEKVDLLNQRKSPIVDTEIEHFLAHKELNFVATTDKEKAYLSADYVVIA
TPTDYDPQTNYFNTSSVEAVIKDVMSINPDAVMVIKSTVPVGYTARIKEELGCKNVIFSPEFLREGKALYDNLHPSRIIV
GERSERAEVFAGLLVEGAVKDDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAEAHGLDARQIIEGVGLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQDVPNNIIGAIVDANRTRKDFVAEAILKREPKVVGIYRLIMKAGSDNFRASSIQG
IMKRIKAKGVEVVVYEPVLKEEDFFNSRVIKDLNEFKQSADVIVSNRMVEELADVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-93 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VP0236 NP_796615.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-96 53