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Name : VP0235 (VP0235) Accession : NP_796614.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 247555 - 249504 bp Length : 1950 bp Strand : + Note : similar to DBJ:BAA33644.1 (AB012957) percent identity 70 in 634 aa DNA sequence : ATGCAACGTCTACAATTTATATGGCAACTTTCTCGGACTAATAAAAGAATTGTTAGTGTATTGATTGATATTATATTGAT CTTTATGGCTTTTCATTTGGCAATCTTGGTTCGTTCTGGAGATTCCAATTACTTCGCTGATCCTGCAGTTTGGGGTATTC AAGTTGCGGTGACAATAGTTACGATTACTGTCTTTGCTCGCTTAGGGCTCTATAGAGCAGTCCTTCGTTACCTTACCTTT CAAGCTTTATTTGTAGTAGCAGCTGGTGCGGTTATTTCTGCTACGCTTGTAGCTGCCCTTAGTTTCTACATGAGTGACCC GTTTCCTAGAACAGTCCCTATTATCTATGGTGCATTTCTTGCGCTTTTTTGTGGGGGGCCTCGTGTTATAGTTCGATCTT TGATTGCACAGAGCTACTCTACACAGAGTAAAGAGGTTCTTATTTATGGCGCGGGATCCGGTGGCCGACAACTTGCAATG GCATTGAGAAGTAGTGGGGACTATCGTGTAAGAGCGTTTATTGACGGCGATTCAACACTATGCAATACAATGATTTTGGG CTTACCTGTTATTGCTATTGAAGATGCAATGCCAATTATTAATAAATACGATGTTTCTCAAGTCTTACTCGCAGTACCAA GTGCTAAGCGCTCAAGGCGTAAGGTCATTCTCGATGAGTTGGCTAAATTACCTGTTGAAGTACTTACGGTCCCAGATATG ACAGATATTGTCTCAGGGAAAGCCAAAATTGATGAGCTTAAGGATGTCGCGATTGAGGATTTGCTGGGGCGTGACCCGGT TGCTCCTCAGCAAGTATTGTTGGAAGCTAATATCAAAGACAAAGTGGTTATGGTGACAGGTGCTGGTGGTTCTATTGGTT CCGAGTTGTGTCGTCAAATTGTAGAGCAGTCTCCTAAATCTATCATTTTATTTGAATTGTCTGAATTTGGTTTATACCAA ATTGACCGGGAGTTGAATCAACTTAAGTTAGAGAAAGGGCTAACTTGCGACATTATTCCTTTGCTGGGTTCTGTTCAGCG CCAACACCGCCTAGAAACGACAATGTCTTCTTTTAAGGTCCAAACAGTATATCACGCAGCAGCATATAAGCACGTTCCAT TAGTCGAATTTAACGTAATTGAAGGTGTGCGTAATAATATTTATGGGACTTATTATACTGCGTGCGCGGCGATTAAAGCC GGTGTTGAATCATTTGTATTAATCTCTACGGATAAAGCTGTCCGCCCTACTAACGTAATGGGCACAACCAAACGAATGGC AGAACTTGGTCTGCAGGCACTTGCTGATCAAGAAAATGCAAAACCAAATGGTACTCGATTTTGCATGGTGCGATTTGGCA ACGTCCTCGGTTCTTCAGGCTCAGTTATTCCTGTTTTTAAAAAACAAATTGCATCAGGTGGACCAGTAACCGTAACTCAC CCAGAGATCACTCGTTTCTTCATGACCATTCCTGAAGCTGCACAGCTAGTTATTCAAGCAGGAGCAATGGGTAAAGGTGG AGATGTATTTGTTTTAGATATGGGTGAGTCAGTAAAAATTACAGACTTAGCATGTAATCTCATTCAACTATCTGGTCTTG AAGTAAAATCTGATGCTAATCCTCATGGTGATATTGAGATTCAATTTTCTGGACTTCGACCTGGTGAGAAACTGTATGAA GAGTTGCTTATTGGCGACAATGTCAAACAAACAGCGCATGAGCGAATAATGACCGCACATGAGGTTCATTTACCTTTAAA AGAGTACGAACTACTGTTGAACGATCTCGATTTCGCCTGCCATAGTATGGATCACGAAAACATTCGTACTTTACTATTGA GTGCACCAACAGGCTTTAATCCTACAGATGGTATTGGCGACTTAGTTTGGAACCATAACCAATCTGAAATTGATTATTCA GACGCTATACAATTTATGAGTCAATCTTAA Protein sequence : MQRLQFIWQLSRTNKRIVSVLIDIILIFMAFHLAILVRSGDSNYFADPAVWGIQVAVTIVTITVFARLGLYRAVLRYLTF QALFVVAAGAVISATLVAALSFYMSDPFPRTVPIIYGAFLALFCGGPRVIVRSLIAQSYSTQSKEVLIYGAGSGGRQLAM ALRSSGDYRVRAFIDGDSTLCNTMILGLPVIAIEDAMPIINKYDVSQVLLAVPSAKRSRRKVILDELAKLPVEVLTVPDM TDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTGAGGSIGSELCRQIVEQSPKSIILFELSEFGLYQ IDRELNQLKLEKGLTCDIIPLLGSVQRQHRLETTMSSFKVQTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKA GVESFVLISTDKAVRPTNVMGTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFKKQIASGGPVTVTH PEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLACNLIQLSGLEVKSDANPHGDIEIQFSGLRPGEKLYE ELLIGDNVKQTAHERIMTAHEVHLPLKEYELLLNDLDFACHSMDHENIRTLLLSAPTGFNPTDGIGDLVWNHNQSEIDYS DAIQFMSQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-81 | 46 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 8e-76 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP0235 | NP_796614.1 | epimerase/dehydratase | VFG0029 | Protein | 1e-113 | 47 |
