Gene Information

Name : VP1995 (VP1995)
Accession : NP_798374.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2090036 - 2090755 bp
Length : 720 bp
Strand : -
Note : similar to GB:AAF94722.1 (AE004234) percent identity 78 in 226 aa

DNA sequence : 
ATGTCGAACAAGTCGCTTGTTGAGCTGACCAACATCTGTAAATACTACTCAAGCGGGGAGGCGGAAGTTCGCGCGCTAGA
CGGCGTTGACTTAACCATTCATCAAGGCGAGTTTCTTTCGATTCTTGGCCCGTCCGGTTCAGGCAAATCAACGTTGATGA
ACATGCTCGGCTGTTTAGATAAGCCCACCGATGGCGAGTACCAACTTGGCGGCCAAAACGTCGCAAGTTTAAGTGCGAAT
GAGCTGGCTGGCATTCGTAACCAAAAGATCGGATTTGTCTTCCAAAGCTTTAACTTATTGGAATACGCGACGGCGCTTGA
TAACGTGGCACTGCCGTTGGTTTACTCTGGCATCAAAGCCAAAGAACGTCGCCAGCGCGCCGCCAAATTGCTAGAGCAAG
TCGGGCTAGGGGATCGTTTAGACCACAAACCAAACCAGCTTTCTGGCGGTCAAAAACAGAGGGTCGCGATTGCAAGAGCC
TTGGTCAACGATCCGCAAATCATCTTAGCGGATGAACCAACGGGTGCATTGGATTCAAAATCCGGCGCAGAGATTGAAGC
CTTGTTCAATCAACTTCACGCTGAAGGCAGAACCTTGATCATCGTGACTCACGATAACGCCCTCGCAGAACGTACCAAGC
GCATCATCACGATCAAAGATGGTAAGGTGATTTCGGATAGAGCGCCGATAGGGAAGGAGAACGCAATTTCTCACTGCTAA

Protein sequence : 
MSNKSLVELTNICKYYSSGEAEVRALDGVDLTIHQGEFLSILGPSGSGKSTLMNMLGCLDKPTDGEYQLGGQNVASLSAN
ELAGIRNQKIGFVFQSFNLLEYATALDNVALPLVYSGIKAKERRQRAAKLLEQVGLGDRLDHKPNQLSGGQKQRVAIARA
LVNDPQIILADEPTGALDSKSGAEIEALFNQLHAEGRTLIIVTHDNALAERTKRIITIKDGKVISDRAPIGKENAISHC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VP1995 NP_798374.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-60 55
VP1995 NP_798374.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-51 50
VP1995 NP_798374.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-41 45
VP1995 NP_798374.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-37 41
VP1995 NP_798374.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-33 41