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Name : VP1696 (VP1696) Accession : NP_798075.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : type III secretion protein YscC Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 1806256 - 1808154 bp Length : 1899 bp Strand : - Note : similar to GB:AAC37020.1 (M74011) percent identity 48 in 594 aa DNA sequence : GTGGTTACCGTAATGCGAACTCTCATGCCAAAAATAGGGCGCATTGCCGCCAAAATGACATTGTGCGCACTGTGTGTCGC TCCGATGTTTTCTGTACAAGCGACAGAGCTCAATTGGCCAGAACAACCGTTTCGTTACTATGCCGATAACGATTCGCTGA AAGATCTGCTTAACAACTTTGGTGCCAACTATCGAGTATCCGTGTCTGTGAGCGACAAAGTGAATGACCGAGTGAGTGGT CGATTCACGCCAGAAGATCCAGCGGAATTTCTCGACTACCTAGCGCAAGTTTACAACTTGATGTGGTACTTCGATGGCGC AGTACTGCACGTTTACAAAGCGACAGAAACGCGCTCCCGATTGCTGCAATTGGAACTGCTTACCGCGCGCGAGCTTCGCA GTACCTTGATTTCAACCGGTGTTTGGGATGCTCGTTATGGTTGGCGCGCTGCCGAAAATAAAGGGCTGGTATATCTAGCT GGGCCGCCGCGTTACGTTGAGTTGGTGGTGCAAACCGCAGAAGCGTTAGAGAGCCGATTGCTGCAAAAGTCCAACTCGAC GGATGAGCTGTTTGTGGAACTCATTCCGCTTAAATATGCCTCGGCGACGGACAGAAGTATCTCGTATCGCGACCAAAGCA TTACCGTTCCGGGGATTGCTTCGGTATTGAGCCGTGTGGTTGGCGGTGTTCAAACTCAAATTACGGATTCTGCGTCTGTA CAAACATCGTCTGTAAATGGATTACCCGCAGAAGCAGCGAAACCTCGTGGCAAAACTGCGTCTGTGCACGGCGGTGCAAC CGTAGAAGCGGAGCCGGGGCTGAATGCGATCATCGTTCGCGATACCCAAGCAAGACTGCCGTTGTATCGCAAGCTGGTCG CTCAACTCGATCAGCCACAATCTCGTATCGAGGTTGCGTTATCTATTGTGGACATCAGCGCAAACGATTTACGTCAGCTC GGTGTGGATTGGCGTGCAGGTGTATCGGTTGGAAACAACCGCATTGTCGACATCAAAACAACCGGCGACGTTGATAACGG TGATGTCACATTGGGCAGTGGTCAGAGTTTCAAGTCCTTGTTGGATTCGACCAACTTGAACTACTTGTTGGCGCAAATTC GTTTATTGGAATCGAAAGGCAGTGCGCAAGTCGTTTCCAGACCAACGCTGCTCACGCAAGAAAACGTCGAAGCGGTGCTA AACAACAGCAGCACGTTTTACGTCAAATTGGTTGGCAAAGAGACGGCGGCTTTGGAAGAAGTGACGTATGGCACCTTGTT GCGTATTGTGCCTCGTATCGTCGGCGACAGATTCGCGACGCGACCAGAGATCAACTTGAGCCTTCACTTAGAAGATGGCG CAAAGATCCCAGATGGTGGTGTGGATGATCTTCCATCAGTACGTAAAACCGAAATCAGTACGTTAGCGACGGTAAAACAA GGGCAAAGCTTACTCATTGGTGGCGTATACCGAGACGAAGTTAGCCATCAGCTACGTAAAGTCCCGCTGTTGGGCGACAT TCCGTACCTAGGTGCTTTGTTCCGTAGTAATACCAACACAACGCGCCGAACAGTTCGCATGTTCATTATCGAGCCGAGAA TCGTGGTCGATGGGATTGGCGACAGCGTGTTGATAGGTAATGAGCATGATTTGCGCCCGAGTATTGGCCAGCTCAACAAC ATTTCGAACAACAGCGCAGAATTTAAATCGGTTGTTGAAGTATTCAGCTGTACGTCAAAAACGCAGGCAGAACGTTACCA ACAAGACTTACTGTCACAGCAAAAGTCTTCGCTGCTAACTCAATGTCAATTGCCGTCAGGGCAAGTAGGCTGGCGAGTCA AAGTGGCGGAATGTGACCTTTCACAGGCCGAATGTGTTCGCCCTTCAGAGGAGCCATAA Protein sequence : MVTVMRTLMPKIGRIAAKMTLCALCVAPMFSVQATELNWPEQPFRYYADNDSLKDLLNNFGANYRVSVSVSDKVNDRVSG RFTPEDPAEFLDYLAQVYNLMWYFDGAVLHVYKATETRSRLLQLELLTARELRSTLISTGVWDARYGWRAAENKGLVYLA GPPRYVELVVQTAEALESRLLQKSNSTDELFVELIPLKYASATDRSISYRDQSITVPGIASVLSRVVGGVQTQITDSASV QTSSVNGLPAEAAKPRGKTASVHGGATVEAEPGLNAIIVRDTQARLPLYRKLVAQLDQPQSRIEVALSIVDISANDLRQL GVDWRAGVSVGNNRIVDIKTTGDVDNGDVTLGSGQSFKSLLDSTNLNYLLAQIRLLESKGSAQVVSRPTLLTQENVEAVL NNSSTFYVKLVGKETAALEEVTYGTLLRIVPRIVGDRFATRPEINLSLHLEDGAKIPDGGVDDLPSVRKTEISTLATVKQ GQSLLIGGVYRDEVSHQLRKVPLLGDIPYLGALFRSNTNTTRRTVRMFIIEPRIVVDGIGDSVLIGNEHDLRPSIGQLNN ISNNSAEFKSVVEVFSCTSKTQAERYQQDLLSQQKSSLLTQCQLPSGQVGWRVKVAECDLSQAECVRPSEEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 8e-122 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP1696 | NP_798075.1 | type III secretion protein YscC | VFG0402 | Protein | 2e-129 | 49 |
| VP1696 | NP_798075.1 | type III secretion protein YscC | VFG0211 | Protein | 1e-123 | 47 |
