Gene Information

Name : VP1694 (VP1694)
Accession : NP_798073.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Virulence
Product : type III export protein YscF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1804493 - 1804741 bp
Length : 249 bp
Strand : -
Note : similar to GB:AAC44777.1 (U56077) percent identity 63 in 73 aa

DNA sequence : 
ATGTCATTTTACGATGCGACCAACAGTGTAAACCTCGATGACGTTAAAACGAAACTTGAGCAACAAGCGAAAGACGCGAA
CAAATCCGTCACCGATGCAATTAAAAATCTAGAAACCAACGCGGACGACCCATCTAAGCTGGCTGAACTTCAGCACGCTA
TCAACAAATGGTCGGTGGTATACAACATCAACGCAACCACCACTCGTGCGATCAAAGATGTGATGCAGTCGATCCTGCAG
AAGGTGTAA

Protein sequence : 
MSFYDATNSVNLDDVKTKLEQQAKDANKSVTDAIKNLETNADDPSKLAELQHAINKWSVVYNINATTTRAIKDVMQSILQ
KV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscF AAO18031.1 LscF Virulence TTSS locus Protein 3e-16 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VP1694 NP_798073.1 type III export protein YscF VFG0214 Protein 5e-18 57
VP1694 NP_798073.1 type III export protein YscF VFG0405 Protein 3e-17 53