Gene Information

Name : VP1688 (VP1688)
Accession : NP_798067.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1317
EC number : -
Position : 1801133 - 1801771 bp
Length : 639 bp
Strand : -
Note : similar to GB:AAC44783.1 (U56077) percent identity 52 in 206 aa

DNA sequence : 
ATGGTTTCATTTGTTGAAATAAAAACCGACAACTTGCAGTTAGCGCCAGGTTTAAAGGTGCTCAAAGCCAAGGATTACGT
TAGTTATCTCGATTCGCAACATTTGGTTGAAGCGGCGAATTCGAAAGCCGACAGCATCATTGCTAAAGCGCAGCAAGCGT
ATGAAACCGAAAAGCAGCGCGGCTATCAAGATGGTTTGGAGCAGGCGAAAATAGAAAATGCGCAGGCGATGGTCGCTACT
TTGGCTCGCTGCAATGAATATTACCTGCAAGTTGAGCACAAAATGACGAACGTCGTCTTAGACGCGGTGCGTAAAATCAT
CGACACATTTGATGACGTTGACACCACGATCAGCGTGGTCAGAGAAGCGCTGCAATTGGTGAGTAATCAAAAGCAAGTGA
TCTTACACGTTCATCCTGAGCAAGTGGTTGACGTGAGAGAGAAAGTTGCTGGCGTTTTGAGTGATTTTCCTGAAGTGGGT
TATGTCGATGTGGTTGCCGATGCGCGCCTCAAAAACGGTGGCTGCATACTGGAAACCGAAGTCGGCATTATTGACGCCAG
TATCGATGGACAGATTCAGGCGTTAAAGCAAGCGATGGTGAAACAACTCAGTGAGCGGAAAATGACGTCACCAGAGTAG

Protein sequence : 
MVSFVEIKTDNLQLAPGLKVLKAKDYVSYLDSQHLVEAANSKADSIIAKAQQAYETEKQRGYQDGLEQAKIENAQAMVAT
LARCNEYYLQVEHKMTNVVLDAVRKIIDTFDDVDTTISVVREALQLVSNQKQVILHVHPEQVVDVREKVAGVLSDFPEVG
YVDVVADARLKNGGCILETEVGIIDASIDGQIQALKQAMVKQLSERKMTSPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 4e-45 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VP1688 NP_798067.1 type III secretion system protein VFG0220 Protein 1e-48 53
VP1688 NP_798067.1 type III secretion system protein VFG0411 Protein 2e-45 52