Gene Information

Name : VP1675 (VP1675)
Accession : NP_798054.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4792
EC number : -
Position : 1790553 - 1791608 bp
Length : 1056 bp
Strand : +
Note : similar to GB:AAG05079.1 (AE004596) percent identity 62 in 347 aa

DNA sequence : 
ATGAGTGGTGAAAAAACCGAACAACCCACCGCCAAAAAGCTCCGCGACGCCCGAAAAAAAGGACAAGTCGCAAAGAGCCA
AGAGATCGTCTCTTCGGCGTTAATTCTGGCACTCATCGCCGTACTGTTCGCCTTTGCCGATTACTACATGTCGCACATCT
CTGCCCTACTTTTGCTGCCAAGCGAGCTCGCATATCAAGGCTTTCAAGACGCATTGATCGATGTTGCCATCGCTATCGCC
AAAGAGATAGCCTACCTCCTCGCGCCAATTATTTTGGTCGCAGCGCTTATCGCGATTTTTTCTAACATGGGACAGTTTGG
TTTTCTTTTTAGTGGCGAATCCATCAAGCCTGACATTAAGAAAATCAACCCTGTCGAGGGCGCAAAGCGCATCTTCTCGC
TAAAAAGCGTCATTGAGTTCATCAAGTCGATACTCAAGGTGTCTCTGCTTTCCTGCATCATTTGGGTTACGTTGCGGGGC
AACATCAACACCTTGATGCAAATTCCAACTTGTGGATTGGAATGTGTCCCTGCGGTGACGGGAGTTATGATTAAACAATT
GATGATCATTTCATCGGTTGGTTTTGTTGTGATAGCTGCGGCAGATTTTGCCTACCAGAAGTTTGACCACACGAAGAAGC
TCAAAATGAGCAAGGACGAAGTGAAACGTGAATACAAAGAGATGGAAGGCAGCCCGGAAATCAAAAGTAAACGCCGTCAG
CTTCATCAAGAACTTCAAGCTTCTAATCAACGCGAAAACGTTAAGCGCTCCAACGTATTAGTAACGAACCCGACTCACAT
CGCGGTTGGTCTGTACTACAAAAAAGGCGAAACACCGTTGCCTGTCATCACTCTGATGGAAACCGATGCGATGGCTAAAC
GCATGATTGCAATTGCGCGAGAAGAAGGCGTGCCAGTAATGCAAAAAGTGCCATTAGCGCGTGCGCTTTATGCCGACGGA
AACGTTGACCAATACATCCCAAGCGAATTAATTGAAGCCACGGCAGAAGTGCTCCGTTGGCTGGCATCATTGGAATCTGA
TGGTACTCAAAGATAG

Protein sequence : 
MSGEKTEQPTAKKLRDARKKGQVAKSQEIVSSALILALIAVLFAFADYYMSHISALLLLPSELAYQGFQDALIDVAIAIA
KEIAYLLAPIILVAALIAIFSNMGQFGFLFSGESIKPDIKKINPVEGAKRIFSLKSVIEFIKSILKVSLLSCIIWVTLRG
NINTLMQIPTCGLECVPAVTGVMIKQLMIISSVGFVVIAAADFAYQKFDHTKKLKMSKDEVKREYKEMEGSPEIKSKRRQ
LHQELQASNQRENVKRSNVLVTNPTHIAVGLYYKKGETPLPVITLMETDAMAKRMIAIAREEGVPVMQKVPLARALYADG
NVDQYIPSELIEATAEVLRWLASLESDGTQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 2e-95 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VP1675 NP_798054.1 translocation protein in type III secretion VFG0185 Protein 6e-88 63
VP1675 NP_798054.1 translocation protein in type III secretion VFG0397 Protein 1e-88 62
VP1675 NP_798054.1 translocation protein in type III secretion VFG0041 Protein 2e-59 45