Gene Information

Name : VP1658 (VP1658)
Accession : NP_798037.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Virulence
Product : low calcium response locus protein H
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG5010
EC number : -
Position : 1777109 - 1777597 bp
Length : 489 bp
Strand : -
Note : similar to GB:AAG05096.1 (AE004597) percent identity 54 in 160 aa

DNA sequence : 
ATGACTAAAACAAACGCGACCGATCCATCTCAAATGCAAGCAGAAGAGCTGCTGTCTTTTCTGGAAGAGGGAGGCACGCT
GAAAATGTTGCACGATGTATCGGCAGATACCATCGAACACATTTACGCGGTCGGCTACAACTTCTTCCAATCAGGAAAGA
TTGAACAAGCCGCCAAAGTTTTCCAACTGCTTAGCATGCTGGATCATTATCAGGCGCGATTTTTCATTGGCCTTGGTGCT
GCTCGTCAGGAACTGGGTGAGTATCTGCAGGCGATTGATGCCTACAGCTACGCAGCGCTCGTGGACATTAACGATCCACG
CCCACCTTTCCACTCTGCGGAATGTCACCTGAAATTGGAACAACTGACAGAAGCAGAGAGTGGGTTTTACAGCGCGAAGG
AGATGTCTGCCGGTAAATCACAATATGCAGACTTGCATCAACGTGCAGGCATCATGTTAGAAGCGGTGAGAAACAAAAGG
AGTAATTAG

Protein sequence : 
MTKTNATDPSQMQAEELLSFLEEGGTLKMLHDVSADTIEHIYAVGYNFFQSGKIEQAAKVFQLLSMLDHYQARFFIGLGA
ARQELGEYLQAIDAYSYAALVDINDPRPPFHSAECHLKLEQLTEAESGFYSAKEMSAGKSQYADLHQRAGIMLEAVRNKR
SN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssH AAO18054.1 LssH Virulence TTSS locus Protein 2e-36 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VP1658 NP_798037.1 low calcium response locus protein H VFG0202 Protein 1e-38 55
VP1658 NP_798037.1 low calcium response locus protein H VFG0380 Protein 4e-37 53