|
Name : VP0140 (VP0140) Accession : NP_796519.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : general secretion pathway protein K Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3156 EC number : - Position : 150573 - 151583 bp Length : 1011 bp Strand : + Note : similar to GB:AAF95866.1 (AE004338) percent identity 66 in 336 aa DNA sequence : ATGGCTAATCGTCAGCGCGGTGTTGCTTTGATTATTGTACTGATGTTGTTAGCGATTATGGCGACCATTGCTGCCACCAT GTCTGAACGTTTGTTTTTGCAGTTTCAGCGCGGTTCAAACCAAATCCATTACCAGCAAGCATATTGGTACAGTGTTGGTG TTGAAGCCTTGGCTGAAGTGGGTATCGAGCAGAGCTACAAAGACAGCGATACCATCAACCTCAGCCAACCTTGGGCGATT AAAGAACAAGTGTACCCATTGGACTATGGTCAAGCTGCAGGACGTATTTGGGATAAGCAAGCGTGCTTTAACCTCAATGT GTTAAGTCGAGTGCAGCCGACCGGACAACAAACCACTCGACCATATTTGGTTCAAGTGCTGCAGCGTTTGTTGGAAGAGT CAGATGTAGAGCCGTATCAAGCGGAAGTGATTGCCGATTCCACTTGGGAATACATTGATTCAGATAGCACAGTACGTTCA ACCACCGGCGTGGAAGACAGCACCTACGAATCGATGAAACCTTCGTATTTAGCGGCTAATGGTTGGATGGCAGACAAAAC TGAACTGCGCGCGGTATATCAAGTGAGTGGTGAAATTTATCAAAAGATTGAGCCCTTGGTATGTGCGATCCCAAGTGATG ATTGGCGTTTAAACGTCAACACGATAGAGGTGGAACAAGCGCCGATTTTAGTCGCTATGTTTTCACCGAACTTGAGCAGC AGCGATGCGGTTCAACTGATAGAAAAGCGTCCCTTCGATGGTTGGGACAGCGTAGACGAATTTCTAGCGGAGTCAGAATT AACTGGCTTGAGCGATGATGTAAAGAAAAACGCCAAAGGCTATTTAGGAGTGGATAGCTCCTTCTTCGAATTGGATGCAC AAGTGTTGGTGGATGATTCACGAGTACGTATCCGAAGCCTTTTGCAAAGTACAAATAGAGAAACGGTGACGGTCGTTCGC CGTCGTTTTGGAGGGATCAGTGAGCGAGTTTCTGACCGTTCGGCTGAGTAG Protein sequence : MANRQRGVALIIVLMLLAIMATIAATMSERLFLQFQRGSNQIHYQQAYWYSVGVEALAEVGIEQSYKDSDTINLSQPWAI KEQVYPLDYGQAAGRIWDKQACFNLNVLSRVQPTGQQTTRPYLVQVLQRLLEESDVEPYQAEVIADSTWEYIDSDSTVRS TTGVEDSTYESMKPSYLAANGWMADKTELRAVYQVSGEIYQKIEPLVCAIPSDDWRLNVNTIEVEQAPILVAMFSPNLSS SDAVQLIEKRPFDGWDSVDEFLAESELTGLSDDVKKNAKGYLGVDSSFFELDAQVLVDDSRVRIRSLLQSTNRETVTVVR RRFGGISERVSDRSAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspK | YP_854400.1 | type II secretion protein GspK | Not tested | PAI I APEC-O1 | Protein | 5e-44 | 42 |
| gspK | CAE85227.1 | GspK, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-44 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP0140 | NP_796519.1 | general secretion pathway protein K | VFG2054 | Protein | 3e-43 | 41 |
