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Name : VP0133 (VP0133) Accession : NP_796512.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 143656 - 145683 bp Length : 2028 bp Strand : + Note : similar to SP:P45779 percent identity 81 in 674 aa DNA sequence : GTGAAACATTGGTTTAGCAAAAGTGCTTGGTTACTGGCAGGGAGTCTACTCTGCGTTCCAGGCGCGATGGCAAATGAATT TAGTGCGAGTTTCAAAGGCACTGACATTCAAGAATTCATCAACATTGTTGGTCGTAACTTAGAAAAGACCATCATCGTTG ACCCTTCGGTGCGCGGTAAAATCGACGTTCGCAGCTACGACGTGTTAAACGAAGAGCAATATTACAGCTTCTTCCTTAAC GTGTTGGAAGTGTACGGCTATGCAGTCGTAGAAATGGACAACGGCGTACTCAAAGTCATCAAAGCAAAAGACTCTAAGAC CTCTGCAATCCCTGTTATGGGTGATGGTAGCGCAAAAGGCGATAGCGTCATCACTCGCGTGGTTGCTGTGCGAAATGTCT CTGTTCGTGAATTGTCACCGCTATTGCGCCAGCTGATTGATAATGCCGGTGCGGGTAATGTGGTTCATTACGATCCAGCT AACATCATCCTGATCACCGGTCGTGCAGCGGTAGTAAACCGTCTAGCAGAAATCATCAAACGCGTTGACCAAGCTGGTGA CAAAGAGATCGAGCTAGTAGAGCTTCGCAATGCCTCGGCTGCTGAAATGGTTCGTATCGTAGAAGCCCTGAACAAAACGA CCAACCAAAAGAGCACGCCTGAGTTTCTTGAACCAAAAATCGTCGCGGATGAGCGTACGAACTCGATCCTGATTTCTGGC GATCCGAAAGTACGTGCACGCCTGAAACGTTTGATTCGTCAACTTGACGTAGAAATGGCAACGAAAGGTAACAACCGAGT GGTTTACCTTAAGTATGCAAAAGCAGAAGACCTAGTTGATGTACTGAAAGGTGTCTCTGACAACCTGCAAGCCGAAAAAC AAGCGGGTCAAAAAGGTGCATCCAGTGCACAACGCGGTGACGTCGTGATTGCGGCTCATGAAGCAACCAACTCACTTGTT CTGACTGCGCCGCCAGATATCATGATGGCTTTGCAAGACGTAATTTCTCAATTAGATATTCGCCGTGCTCAGGTTCTGAT TGAAGCCTTGATTGTTGAAATGTCTGAAGGTGACGGTATCAACCTGGGCGTTCAGTGGGGGTCTCTAGAAACTGGTGCGG TTATTCAATATGGTAATGCGGGTGCACCAATTGGCCAAGTCATGGTCGGTTTAGAAGAAGCTAAAGATACAGTAGAGAAA AAACCGATTCGTGACTCAGATACTGGTGCTATCAAATATTACGAGGAAACGACGACAAAAGGTGATTATTCTACTTTAGC CTCTGCTCTCAAAAATGTTAATGGTGCAGCAATGAGCATTGTGATGGGAGATTGGACTGCTTTGGTTAGTGCGGTTGCTT CGGATTCCAACTCAAACATCCTATCTTCTCCAAGTATCACGGTGATGGATAACGGCGAAGCCTCATTCATCGTGGGTGAG GAAGTGCCTGTTATTACTGGCTCGACTGCTGGTTCAAACAACGACAACCCATTCCAAACCGTTGATCGTAAAGAAGTCGG TATCAAGCTAAAAGTTGTACCGCAGATCAACGAAGGTGACTCTGTTCAGCTAAATATTGAACAAGAAGTCTCAAACGTAT TGGGTGCTAATGGTGCCGTTGACGTTCGTTTCGCTAAGCGCCAGCTTAACACTTCCGTGATGATCCAAGATGGCCAGATG CTGGTGCTAGGTGGCTTGGTTGATGAACGTGCACTAGAAAGTGAATCGAAAGTGCCACTGCTTGGTGATATTCCAGTATT GGGCCACTTGTTCAAATCAACCAGTACACAAACTCAGAAACGCAATTTGATGGTCTTCATTAAGCCAACCATCATCCGTG ATGGTATGACCGCAGACGGTATCACTCAACGTAAATACAACTTTATTCGCGCCGAGCAACTGTACAAGGCTGACCAAGGT TTGAAGTTAATGTCGGACGATAAAATTCCTGTAATGCCTGCATTTGGCCAGGATCGTAAGCATCCTGCTGAAATCCAAGC GTTTATCGATCAAATGGAAAAGAACTAA Protein sequence : MKHWFSKSAWLLAGSLLCVPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEEQYYSFFLN VLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVMGDGSAKGDSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPA NIILITGRAAVVNRLAEIIKRVDQAGDKEIELVELRNASAAEMVRIVEALNKTTNQKSTPEFLEPKIVADERTNSILISG DPKVRARLKRLIRQLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQKGASSAQRGDVVIAAHEATNSLV LTAPPDIMMALQDVISQLDIRRAQVLIEALIVEMSEGDGINLGVQWGSLETGAVIQYGNAGAPIGQVMVGLEEAKDTVEK KPIRDSDTGAIKYYEETTTKGDYSTLASALKNVNGAAMSIVMGDWTALVSAVASDSNSNILSSPSITVMDNGEASFIVGE EVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDVRFAKRQLNTSVMIQDGQM LVLGGLVDERALESESKVPLLGDIPVLGHLFKSTSTQTQKRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKADQG LKLMSDDKIPVMPAFGQDRKHPAEIQAFIDQMEKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-163 | 55 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-171 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP0133 | NP_796512.1 | general secretion pathway protein D | VFG2047 | Protein | 5e-160 | 54 |
