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Name : VP1178 (VP1178) Accession : NP_797557.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Resistance Product : AcrB/AcrD/AcrF family transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 1234695 - 1237796 bp Length : 3102 bp Strand : + Note : similar to GB:AAF94823.1 (AE004245) percent identity 85 in 1033 aa DNA sequence : ATGAGCGAGCAAAACAAAGAGCCTCAAAGTGATGATGATGTAACGGGCATTGCGGCTTATTTCATTCGAAATCGCGTGAT TAGCTGGATGGTGTCTTTGATCTTCTTGATTGGTGGTATTGCTGCCTTCTTCGGGTTGGGACGTTTAGAAGATCCGGCCT TTACCATCAAAGATGCGATGGTAGTGACGTCATACCCAGGTGCGACGCCGCAACAAGTGGAAGAAGAAGTGACGTACCCG CTGGAAAAAGCCATCCAGCAACTGACTTACGTTGACGAAGTGAACTCCATTTCCAACCGTGGTTTATCTCAGATCACCGT GACGATGAAAAACAACTATGGTCCCGATGATTTACCACAAATTTGGGATGAATTGCGTCGAAAAGTGAACGACTTAAAAG TCACGTTACCACCGGGTGTTAATGAGCCTCAGGTTATTGATGACTTCGGTGATGTGTACGGCATCTTGTTGGCAGTGACA GGGGATGGCTACAGCTATAAAGAGTTGCTGGATTATGTCGACTACTTACGCCGTGAACTTGAACTGGTCGATGGCGTCAG CAAGGTTTCTGTCTCTGGTCAGCAGCAAGAGCAAGTCTTTATTGAAGTTTCGATGAAGAAGCTAAGCAGTATTGGTTTGT CGCCAAACACGGTTTTTAACTTGCTGTCCACGCAAAATATTGTGTCTGATGCTGGCGCTATTCGTATTGGGGATGAGTAC ATTCGAATTCAGCCTACGGGTGAGTTCCAAAGCGTTGATGAGTTAGGGGATCTGTTGATCACCGAATCTGGCGCGCAAGG GCTTATTTTCCTCAAAGACGTAGCAGAAATTAAACGTGGCTATGTTGAAGTGCCGAGTAACATCATCAACTTTAATGGCA GCTTAGCGCTGAACGTTGGCGTGTCGTTTGCCCAAGGTGTCAACGTGGTTGAAGTCGGTAAGGCCTTTGATCGTCGCCTT GCCGAGTTGAAGTATCAACAACCGGTTGGTGTCGAAATCTCAGAGATTTACAGCCAACCGAAAGAGGTAGATAAATCGGT CAGCGGCTTTGTGATCAGTTTGGCGCAGGCGGTTGGCATCGTAATTATTGTATTGCTGTTCTTTATGGGGCTGCGCTCGG GTCTACTGATAGGCCTGATCTTGCTACTCACGGTTTTAGGTACGTTCATCTTCATGAAATATCTCGCGATTGACTTGCAG CGTATCTCTCTGGGTGCATTGGTTATCGCACTCGGTATGTTGGTGGATAATGCCATCGTGGTGGTGGAAGGGATCTTAAT CGGCACTCAAAAAGGGCGAACGCGATTACAAGCCGCGACGGATATTGTCACTCAAACCAAATGGCCGCTATTGGGTGCAA CTGTAATTGCGGTAACGGCATTTGCGCCAATTGGTTTGTCTGAAGACTCCACGGGTGAGTACTGTGGCACCTTGTTTACG GTGCTGCTGATTTCCCTCATGCTGAGTTGGTTTACTGCTATTTCGCTAACGCCGTTCTTTGCCGATATTTTCTTTAAGGG GCAGAAAATCAAGCAAGGTGAAGGTGAGGAAAACGACCCATATAACGGCATTATTTTTGTGGCATATAAAAAGTTTTTAG AGTTTTGTATGCGTCGCGCGTGGTTAACGGTCGTGGTTTTGATTGTTGGGCTTGGTGCAAGTGTTTATGGGTTTACCTTG GTAAAACAATCGTTTTTCCCATCTTCAACCACGCCAATTTTCCAATTGGATGTGTGGCTACCGGAAGGTACAGATATTCG TGCGACGAACGATAAGCTAAAAGAACTGGAATCTTGGCTTGCTGAGCAAGAGCACGTTGATCACATCACAACAACTGCGG GTAAAGGTCTGCAACGCTTTATGCTGACGTATGCTCCGGAAAAAAGCTATGCCGCTTATGGTGAAATCACTACGCGAGTT GATAACTACGAAGCGCTTGCGCCGTTAATGGCACGGTTTAGGGATCACCTAAAAGCCAACTATCCAGAGATCAATTACAA GCTCAAACAGATTGAATTGGGCCCTGGTGGCGGCGCGAAAATTGAAGCGCGTATTATCGGCTCTGATCCAACGGTGCTTC GCACGATTGCGGCGCAAGTAATGGATATCATGTACGCCGATCCGAGCGCGACCAATATTCGCCACGATTGGCGTGAGCGA ACTCAAGTGCTTGAGCCTCAGTTCAACGAAAGCCAAGCGCGTCGTTACGGTATCACTAAATCTGATGTGGATGATTTCTT ATCGATGTCGTTCTCGGGAATGACGATAGGTCTTTACCGTGACGGTACTACGTTGATGCCGATTGTGGCGCGTTTACCAG AAGACGAGCGTATCGATATTCGTAACATCGAAGGCATGAAAATTTGGAGCCCTGCGCAGAGTGAGTTTATCCCACTCCAG CAAGTCACAATGGGTTACGACATGCGTTGGGAAGACCCTATCATCGTGCGTAAGAACCGTAAGCGTATGCTTACTGTGAT GGCGGACCCTGATATTCTCGGTGAAGAAACCGCATCAACGTTGCAAAAACGCCTACAGCCGCAAATCGAAGCTATTCAAA TGCCACCTGGCTATTCTTTAGAATGGGGTGGTGAGTACGAGTCTTCAGGTGATGCTCAAGAGTCTCTGTTCACAACGATG CCGATGGGCTACTTGTTCATGTTCTTGATCACCGTGTTCCTATTCAACTCGATTAAAGAACCGCTGATTGTTTGGCTCAC TGTGCCACTGGCATTGATTGGTGTCACCACTGGCTTGTTGGCACTCAATACGCCGTTTGGCTTTATGGCGTTGCTGGGCT TTTTGAGCTTATCTGGTATGGTACTCAAAAATGGCATTGTTCTGCTCGACCAAATTGAAATTGAGATGAAGTCGGGGAAA GAGGCGTATGACGCAGTGGTTGATGCGGCAGTCAGTCGTGTTCGCCCAGTGTGTATGGCAGCAATTACCACCATTTTGGG TATGATTCCTCTTCTACCTGATATCTTCTTTAAACCGATGGCGGTAACGATTATGTTTGGTTTAGGTTTTGCCACCATCC TGACACTTATTGTCGTGCCAGTGTTGTATCGTCTGTTCCATAAAGTGTCGGTGCCGAAATAG Protein sequence : MSEQNKEPQSDDDVTGIAAYFIRNRVISWMVSLIFLIGGIAAFFGLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYP LEKAIQQLTYVDEVNSISNRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKVTLPPGVNEPQVIDDFGDVYGILLAVT GDGYSYKELLDYVDYLRRELELVDGVSKVSVSGQQQEQVFIEVSMKKLSSIGLSPNTVFNLLSTQNIVSDAGAIRIGDEY IRIQPTGEFQSVDELGDLLITESGAQGLIFLKDVAEIKRGYVEVPSNIINFNGSLALNVGVSFAQGVNVVEVGKAFDRRL AELKYQQPVGVEISEIYSQPKEVDKSVSGFVISLAQAVGIVIIVLLFFMGLRSGLLIGLILLLTVLGTFIFMKYLAIDLQ RISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDSTGEYCGTLFT VLLISLMLSWFTAISLTPFFADIFFKGQKIKQGEGEENDPYNGIIFVAYKKFLEFCMRRAWLTVVVLIVGLGASVYGFTL VKQSFFPSSTTPIFQLDVWLPEGTDIRATNDKLKELESWLAEQEHVDHITTTAGKGLQRFMLTYAPEKSYAAYGEITTRV DNYEALAPLMARFRDHLKANYPEINYKLKQIELGPGGGAKIEARIIGSDPTVLRTIAAQVMDIMYADPSATNIRHDWRER TQVLEPQFNESQARRYGITKSDVDDFLSMSFSGMTIGLYRDGTTLMPIVARLPEDERIDIRNIEGMKIWSPAQSEFIPLQ QVTMGYDMRWEDPIIVRKNRKRMLTVMADPDILGEETASTLQKRLQPQIEAIQMPPGYSLEWGGEYESSGDAQESLFTTM PMGYLFMFLITVFLFNSIKEPLIVWLTVPLALIGVTTGLLALNTPFGFMALLGFLSLSGMVLKNGIVLLDQIEIEMKSGK EAYDAVVDAAVSRVRPVCMAAITTILGMIPLLPDIFFKPMAVTIMFGLGFATILTLIVVPVLYRLFHKVSVPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP1178 | NP_797557.1 | AcrB/AcrD/AcrF family transporter | BAC0519 | Protein | 0.0 | 100 |
| VP1178 | NP_797557.1 | AcrB/AcrD/AcrF family transporter | BAC0428 | Protein | 0.0 | 86 |
| VP1178 | NP_797557.1 | AcrB/AcrD/AcrF family transporter | BAC0526 | Protein | 0.0 | 57 |
| VP1178 | NP_797557.1 | AcrB/AcrD/AcrF family transporter | BAC0425 | Protein | 0.0 | 43 |
