Gene Information

Name : VP1077 (VP1077)
Accession : NP_797456.1
Strain :
Genome accession: NC_004603
Putative virulence/resistance : Unknown
Product : phage family integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1127706 - 1128944 bp
Length : 1239 bp
Strand : +
Note : similar to GB:AAF94908.1 (AE004253) percent identity 56 in 409 aa

DNA sequence : 
ATGTCGCACTTAATACATCGTCTGAAAGACAAGGAAATCGAACAAGCACAGGGCCGAGATCGAATCTATCGTTTACCTGA
TGGCGGTGGTCTCTATCTATTGGTGAAACCCAACAACCTCAAATACTGGGAGTTTCGTTACACAAAGCCAGGTACAAAAA
ACAGAACCTTCTTGGGATTGGGTAGCCTAGACATGCTCAATGTTGATGGTGCTCGTGACAAAGCGTTTGAGATGCGCAAA
CTTCTGAAGGAAGGTATTGACCCTAAATTAGACAGGATCGAGAAGAGGACCCAGATTCAACAAGAGCAAGCTTGTACATT
CAAGTCAGTCGCTGATGAATGGGTTAAGACCAAGACGAAACTAAAACCTAAGACCGTCCAAGGTAACTGGAGAAAGCTCG
AGCTTTATGCTTTTCCTAAGTTCGGTGAGATCCCGGTTAAGTCACTGACGCCAATAATAGTTCAGGAAGCGTTTAGGCCC
ATTGCTCGTAGAGGCAAGTTGGAGACAGTAAAACGCACCATCCAGTTGGTAAATGAAATCATGCGCTTTGCCATCAATAG
CGGTTTGATCCAACACAACGTTTTATCTGGAGTTGGAGAAACTTTTGCTTCTCCTGATGTGAAACACATGGCGGTACTTA
AACCTGATGAACTAACAGAGTTACTACAGACAGTTGCAACTGCAAATATGCAGCTGGCTACCAAATGTTTAATTGAGTGG
CAGCTGCACACCATGACTAGACCAAGTGAAGCTGCTGGTGCTCGCTGGGATGAGATTGACATAGAAAATCGACTCTGGAT
TATTCCAGACACACGGATGAAAATGAAACGTGAACATCGCATTCCATTGACCGATCAGACTATCGCCATACTGGAGCGCA
TACATCCTATTAGTGGGCATAGGGTACATGTCTTCCCCTCTATGCGCTTCCCCAAGCGGTCTATTGACTCTGAGACTATA
AACAAGGCGTTGGGGCGTATTGGATTCAAAGATCGCACTACCGCGCATGGCATGCGCTCTCTCGCCAGTACAACGTTGAA
TGAAAGAGGTTTTGACCCGGATATTATTGAGGCTGCTTTGGCTCACCAGGATCGAAATGCTATTCGTGCCGCTTACAATC
GGACAGATTATCTGGAACGTCGACGAAAAATGATGGAGTGGTGGAGTAGTTATATTGATGATGCAGCAGTAGGTTCATTG
TCAGTAACAGGTGCTGTACATTTAAGAGCGATCGGTTGA

Protein sequence : 
MSHLIHRLKDKEIEQAQGRDRIYRLPDGGGLYLLVKPNNLKYWEFRYTKPGTKNRTFLGLGSLDMLNVDGARDKAFEMRK
LLKEGIDPKLDRIEKRTQIQQEQACTFKSVADEWVKTKTKLKPKTVQGNWRKLELYAFPKFGEIPVKSLTPIIVQEAFRP
IARRGKLETVKRTIQLVNEIMRFAINSGLIQHNVLSGVGETFASPDVKHMAVLKPDELTELLQTVATANMQLATKCLIEW
QLHTMTRPSEAAGARWDEIDIENRLWIIPDTRMKMKREHRIPLTDQTIAILERIHPISGHRVHVFPSMRFPKRSIDSETI
NKALGRIGFKDRTTAHGMRSLASTTLNERGFDPDIIEAALAHQDRNAIRAAYNRTDYLERRRKMMEWWSSYIDDAAVGSL
SVTGAVHLRAIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 9e-115 58
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-114 57
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-114 57
int AAK20773.1 integrase Not tested VPI Protein 1e-94 50
int AAK20803.1 integrase Not tested VPI Protein 1e-94 50
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-94 50
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-94 50
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-94 50
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-87 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VP1077 NP_797456.1 phage family integrase VFG1092 Protein 1e-114 57